RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
CHD1L-209ENST00000492728 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
CHD1L-209ENST00000492728 A0A1B0GU69 56 aa6.79□□□□□ -1.32
CHD1L-209ENST00000492728 PSPHP1O15172 72 aa6.79□□□□□ -1.32
CHD1L-209ENST00000492728 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
CHD1L-209ENST00000492728 SEC61GP60059 68 aa6.74□□□□□ -1.33
CHD1L-209ENST00000492728 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
CHD1L-209ENST00000492728 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
CHD1L-209ENST00000492728 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
CHD1L-209ENST00000492728 A0A1B0GU33 70 aa6.69□□□□□ -1.34
CHD1L-209ENST00000492728 MT1GP13640 62 aa6.64□□□□□ -1.35
CHD1L-209ENST00000492728 A6NED7 52 aa6.62□□□□□ -1.35
CHD1L-209ENST00000492728 UQCR11O14957 56 aa6.6□□□□□ -1.35
CHD1L-209ENST00000492728 MT1MQ8N339 61 aa6.59□□□□□ -1.35
CHD1L-209ENST00000492728 MT1LQ93083 61 aa6.58□□□□□ -1.36
CHD1L-209ENST00000492728 CDC42SE1Q9NRR8 79 aa6.55□□□□□ -1.36
CHD1L-209ENST00000492728 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
CHD1L-209ENST00000492728 A8MU10 97 aa6.54□□□□□ -1.36
CHD1L-209ENST00000492728 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
CHD1L-209ENST00000492728 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
CHD1L-209ENST00000492728 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
CHD1L-209ENST00000492728 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
CHD1L-209ENST00000492728 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
CHD1L-209ENST00000492728 MT4P47944 62 aa6.47□□□□□ -1.37
CHD1L-209ENST00000492728 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
CHD1L-209ENST00000492728 PRO0628Q9UI54 55 aa6.45□□□□□ -1.38
CHD1L-209ENST00000492728 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
CHD1L-209ENST00000492728 TNP1P09430 55 aa6.37□□□□□ -1.39
CHD1L-209ENST00000492728 AHNAK2Q8IVF2 5795 aa6.36□□□□□ -1.39
CHD1L-209ENST00000492728 K7ERS5 55 aa6.23□□□□□ -1.41
CHD1L-209ENST00000492728 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
CHD1L-209ENST00000492728 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
CHD1L-209ENST00000492728 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
CHD1L-209ENST00000492728 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
CHD1L-209ENST00000492728 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CHD1L-209ENST00000492728 ROMO1P60602 79 aa5.98□□□□□ -1.45
CHD1L-209ENST00000492728 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
CHD1L-209ENST00000492728 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
CHD1L-209ENST00000492728 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
CHD1L-209ENST00000492728 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
CHD1L-209ENST00000492728 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
CHD1L-209ENST00000492728 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
CHD1L-209ENST00000492728 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
CHD1L-209ENST00000492728 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CHD1L-209ENST00000492728 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
CHD1L-209ENST00000492728 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
CHD1L-209ENST00000492728 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.68□□□□□ -1.5
CHD1L-209ENST00000492728 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
CHD1L-209ENST00000492728 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
CHD1L-209ENST00000492728 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
CHD1L-209ENST00000492728 MT1AP04731 61 aa5.57□□□□□ -1.52
CHD1L-209ENST00000492728 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
CHD1L-209ENST00000492728 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
CHD1L-209ENST00000492728 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
CHD1L-209ENST00000492728 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CHD1L-209ENST00000492728 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
CHD1L-209ENST00000492728 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
CHD1L-209ENST00000492728 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
CHD1L-209ENST00000492728 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
CHD1L-209ENST00000492728 MT3P25713 68 aa5.06□□□□□ -1.6
CHD1L-209ENST00000492728 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
CHD1L-209ENST00000492728 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
CHD1L-209ENST00000492728 KRTAP4-4Q9BYR3 166 aa4.76□□□□□ -1.65
CHD1L-209ENST00000492728 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
CHD1L-209ENST00000492728 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
CHD1L-209ENST00000492728 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
CHD1L-209ENST00000492728 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
CHD1L-209ENST00000492728 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
CHD1L-209ENST00000492728 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
CHD1L-209ENST00000492728 INE1O15225 51 aa3.86□□□□□ -1.79
CHD1L-209ENST00000492728 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
CHD1L-209ENST00000492728 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
CHD1L-209ENST00000492728 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CHD1L-209ENST00000492728 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
CHD1L-209ENST00000492728 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
CHD1L-209ENST00000492728 PRM1P04553 51 aa3.1□□□□□ -1.91
CHD1L-209ENST00000492728 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
CHD1L-209ENST00000492728 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms