RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 A8MU10 97 aa6.04□□□□□ -1.44
PKP4-214ENST00000492496 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
PKP4-214ENST00000492496 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
PKP4-214ENST00000492496 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
PKP4-214ENST00000492496 MT1EP04732 61 aa5.93□□□□□ -1.46
PKP4-214ENST00000492496 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
PKP4-214ENST00000492496 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
PKP4-214ENST00000492496 UQCR11O14957 56 aa5.88□□□□□ -1.47
PKP4-214ENST00000492496 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
PKP4-214ENST00000492496 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
PKP4-214ENST00000492496 TNP1P09430 55 aa5.86□□□□□ -1.47
PKP4-214ENST00000492496 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
PKP4-214ENST00000492496 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
PKP4-214ENST00000492496 MT1GP13640 62 aa5.76□□□□□ -1.49
PKP4-214ENST00000492496 V9GYY9 64 aa5.75□□□□□ -1.49
PKP4-214ENST00000492496 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
PKP4-214ENST00000492496 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
PKP4-214ENST00000492496 Q1T7F1 81 aa5.7□□□□□ -1.5
PKP4-214ENST00000492496 MT1LQ93083 61 aa5.68□□□□□ -1.5
PKP4-214ENST00000492496 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PKP4-214ENST00000492496 PSPHP1O15172 72 aa5.66□□□□□ -1.5
PKP4-214ENST00000492496 K7ERS5 55 aa5.64□□□□□ -1.51
PKP4-214ENST00000492496 MT1MQ8N339 61 aa5.64□□□□□ -1.51
PKP4-214ENST00000492496 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
PKP4-214ENST00000492496 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
PKP4-214ENST00000492496 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
PKP4-214ENST00000492496 A6NED7 52 aa5.49□□□□□ -1.53
PKP4-214ENST00000492496 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
PKP4-214ENST00000492496 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
PKP4-214ENST00000492496 MT3P25713 68 aa5.45□□□□□ -1.54
PKP4-214ENST00000492496 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
PKP4-214ENST00000492496 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
PKP4-214ENST00000492496 MT4P47944 62 aa5.31□□□□□ -1.56
PKP4-214ENST00000492496 ROMO1P60602 79 aa5.25□□□□□ -1.57
PKP4-214ENST00000492496 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
PKP4-214ENST00000492496 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
PKP4-214ENST00000492496 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
PKP4-214ENST00000492496 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
PKP4-214ENST00000492496 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
PKP4-214ENST00000492496 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
PKP4-214ENST00000492496 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
PKP4-214ENST00000492496 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
PKP4-214ENST00000492496 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
PKP4-214ENST00000492496 LCE1FQ5T754 118 aa4.93□□□□□ -1.62
PKP4-214ENST00000492496 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.62
PKP4-214ENST00000492496 MT1AP04731 61 aa4.85□□□□□ -1.63
PKP4-214ENST00000492496 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
PKP4-214ENST00000492496 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
PKP4-214ENST00000492496 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
PKP4-214ENST00000492496 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
PKP4-214ENST00000492496 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
PKP4-214ENST00000492496 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
PKP4-214ENST00000492496 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
PKP4-214ENST00000492496 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
PKP4-214ENST00000492496 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
PKP4-214ENST00000492496 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
PKP4-214ENST00000492496 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
PKP4-214ENST00000492496 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
PKP4-214ENST00000492496 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
PKP4-214ENST00000492496 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
PKP4-214ENST00000492496 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
PKP4-214ENST00000492496 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
PKP4-214ENST00000492496 MUC5ACP98088 5654 aa4□□□□□ -1.77
PKP4-214ENST00000492496 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
PKP4-214ENST00000492496 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
PKP4-214ENST00000492496 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
PKP4-214ENST00000492496 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
PKP4-214ENST00000492496 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
PKP4-214ENST00000492496 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
PKP4-214ENST00000492496 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
PKP4-214ENST00000492496 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PKP4-214ENST00000492496 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
PKP4-214ENST00000492496 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
PKP4-214ENST00000492496 PRM1P04553 51 aa2.67□□□□□ -1.98
PKP4-214ENST00000492496 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PKP4-214ENST00000492496 INE1O15225 51 aa2.41□□□□□ -2.02
PKP4-214ENST00000492496 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
PKP4-214ENST00000492496 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 74.9 ms