RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
PTPRE-210ENST00000492479 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
PTPRE-210ENST00000492479 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
PTPRE-210ENST00000492479 MT1EP04732 61 aa5.04□□□□□ -1.6
PTPRE-210ENST00000492479 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
PTPRE-210ENST00000492479 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
PTPRE-210ENST00000492479 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
PTPRE-210ENST00000492479 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
PTPRE-210ENST00000492479 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
PTPRE-210ENST00000492479 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
PTPRE-210ENST00000492479 MT1LQ93083 61 aa4.9□□□□□ -1.63
PTPRE-210ENST00000492479 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
PTPRE-210ENST00000492479 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
PTPRE-210ENST00000492479 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
PTPRE-210ENST00000492479 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
PTPRE-210ENST00000492479 MT1GP13640 62 aa4.83□□□□□ -1.64
PTPRE-210ENST00000492479 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
PTPRE-210ENST00000492479 SPRR2EP22531 72 aa4.78□□□□□ -1.64
PTPRE-210ENST00000492479 SPRR2BP35325 72 aa4.78□□□□□ -1.64
PTPRE-210ENST00000492479 SPRR2AP35326 72 aa4.78□□□□□ -1.64
PTPRE-210ENST00000492479 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
PTPRE-210ENST00000492479 NEBP20929 6669 aa4.77□□□□□ -1.65
PTPRE-210ENST00000492479 MT1MQ8N339 61 aa4.74□□□□□ -1.65
PTPRE-210ENST00000492479 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
PTPRE-210ENST00000492479 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
PTPRE-210ENST00000492479 SPRR2DP22532 72 aa4.62□□□□□ -1.67
PTPRE-210ENST00000492479 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
PTPRE-210ENST00000492479 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
PTPRE-210ENST00000492479 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
PTPRE-210ENST00000492479 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
PTPRE-210ENST00000492479 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
PTPRE-210ENST00000492479 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
PTPRE-210ENST00000492479 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
PTPRE-210ENST00000492479 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
PTPRE-210ENST00000492479 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
PTPRE-210ENST00000492479 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
PTPRE-210ENST00000492479 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
PTPRE-210ENST00000492479 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
PTPRE-210ENST00000492479 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
PTPRE-210ENST00000492479 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
PTPRE-210ENST00000492479 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
PTPRE-210ENST00000492479 MT1AP04731 61 aa4.19□□□□□ -1.74
PTPRE-210ENST00000492479 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
PTPRE-210ENST00000492479 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
PTPRE-210ENST00000492479 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
PTPRE-210ENST00000492479 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
PTPRE-210ENST00000492479 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
PTPRE-210ENST00000492479 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
PTPRE-210ENST00000492479 MT4P47944 62 aa3.96□□□□□ -1.78
PTPRE-210ENST00000492479 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
PTPRE-210ENST00000492479 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
PTPRE-210ENST00000492479 MT3P25713 68 aa3.79□□□□□ -1.8
PTPRE-210ENST00000492479 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
PTPRE-210ENST00000492479 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
PTPRE-210ENST00000492479 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
PTPRE-210ENST00000492479 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
PTPRE-210ENST00000492479 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
PTPRE-210ENST00000492479 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
PTPRE-210ENST00000492479 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
PTPRE-210ENST00000492479 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
PTPRE-210ENST00000492479 INE1O15225 51 aa3.38□□□□□ -1.87
PTPRE-210ENST00000492479 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
PTPRE-210ENST00000492479 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
PTPRE-210ENST00000492479 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
PTPRE-210ENST00000492479 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
PTPRE-210ENST00000492479 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
PTPRE-210ENST00000492479 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
PTPRE-210ENST00000492479 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
PTPRE-210ENST00000492479 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
PTPRE-210ENST00000492479 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
PTPRE-210ENST00000492479 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PTPRE-210ENST00000492479 PRM1P04553 51 aa2.83□□□□□ -1.96
PTPRE-210ENST00000492479 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
PTPRE-210ENST00000492479 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
PTPRE-210ENST00000492479 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
PTPRE-210ENST00000492479 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
PTPRE-210ENST00000492479 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
PTPRE-210ENST00000492479 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 92.1 ms