RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 MT1EP04732 61 aa5.43□□□□□ -1.54
SS18L1-205ENST00000492466 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
SS18L1-205ENST00000492466 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
SS18L1-205ENST00000492466 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
SS18L1-205ENST00000492466 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
SS18L1-205ENST00000492466 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
SS18L1-205ENST00000492466 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SS18L1-205ENST00000492466 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
SS18L1-205ENST00000492466 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
SS18L1-205ENST00000492466 MT1GP13640 62 aa5.26□□□□□ -1.57
SS18L1-205ENST00000492466 MT1LQ93083 61 aa5.21□□□□□ -1.58
SS18L1-205ENST00000492466 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
SS18L1-205ENST00000492466 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
SS18L1-205ENST00000492466 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
SS18L1-205ENST00000492466 MT1MQ8N339 61 aa5.18□□□□□ -1.58
SS18L1-205ENST00000492466 MT4P47944 62 aa5.15□□□□□ -1.59
SS18L1-205ENST00000492466 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
SS18L1-205ENST00000492466 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
SS18L1-205ENST00000492466 ROMO1P60602 79 aa5.09□□□□□ -1.59
SS18L1-205ENST00000492466 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
SS18L1-205ENST00000492466 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
SS18L1-205ENST00000492466 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
SS18L1-205ENST00000492466 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
SS18L1-205ENST00000492466 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
SS18L1-205ENST00000492466 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
SS18L1-205ENST00000492466 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
SS18L1-205ENST00000492466 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
SS18L1-205ENST00000492466 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
SS18L1-205ENST00000492466 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SS18L1-205ENST00000492466 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
SS18L1-205ENST00000492466 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
SS18L1-205ENST00000492466 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
SS18L1-205ENST00000492466 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
SS18L1-205ENST00000492466 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
SS18L1-205ENST00000492466 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
SS18L1-205ENST00000492466 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SS18L1-205ENST00000492466 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
SS18L1-205ENST00000492466 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
SS18L1-205ENST00000492466 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
SS18L1-205ENST00000492466 MT1AP04731 61 aa4.45□□□□□ -1.7
SS18L1-205ENST00000492466 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
SS18L1-205ENST00000492466 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SS18L1-205ENST00000492466 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SS18L1-205ENST00000492466 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SS18L1-205ENST00000492466 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
SS18L1-205ENST00000492466 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
SS18L1-205ENST00000492466 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
SS18L1-205ENST00000492466 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
SS18L1-205ENST00000492466 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
SS18L1-205ENST00000492466 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SS18L1-205ENST00000492466 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
SS18L1-205ENST00000492466 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
SS18L1-205ENST00000492466 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
SS18L1-205ENST00000492466 MT3P25713 68 aa4.08□□□□□ -1.76
SS18L1-205ENST00000492466 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SS18L1-205ENST00000492466 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
SS18L1-205ENST00000492466 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SS18L1-205ENST00000492466 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
SS18L1-205ENST00000492466 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SS18L1-205ENST00000492466 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SS18L1-205ENST00000492466 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
SS18L1-205ENST00000492466 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
SS18L1-205ENST00000492466 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
SS18L1-205ENST00000492466 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
SS18L1-205ENST00000492466 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
SS18L1-205ENST00000492466 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SS18L1-205ENST00000492466 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
SS18L1-205ENST00000492466 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
SS18L1-205ENST00000492466 H3BS24 57 aa3.06□□□□□ -1.92
SS18L1-205ENST00000492466 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
SS18L1-205ENST00000492466 INE1O15225 51 aa2.93□□□□□ -1.94
SS18L1-205ENST00000492466 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
SS18L1-205ENST00000492466 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
SS18L1-205ENST00000492466 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SS18L1-205ENST00000492466 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
SS18L1-205ENST00000492466 PRM1P04553 51 aa2.62□□□□□ -1.99
SS18L1-205ENST00000492466 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SS18L1-205ENST00000492466 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms