RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
MDC1-207ENST00000492462 MT4P47944 62 aa4.28□□□□□ -1.72
MDC1-207ENST00000492462 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
MDC1-207ENST00000492462 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
MDC1-207ENST00000492462 MT1GP13640 62 aa4.23□□□□□ -1.73
MDC1-207ENST00000492462 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
MDC1-207ENST00000492462 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
MDC1-207ENST00000492462 MT1LQ93083 61 aa4.21□□□□□ -1.74
MDC1-207ENST00000492462 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
MDC1-207ENST00000492462 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
MDC1-207ENST00000492462 TNP1P09430 55 aa4.19□□□□□ -1.74
MDC1-207ENST00000492462 MT1MQ8N339 61 aa4.19□□□□□ -1.74
MDC1-207ENST00000492462 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
MDC1-207ENST00000492462 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
MDC1-207ENST00000492462 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
MDC1-207ENST00000492462 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
MDC1-207ENST00000492462 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
MDC1-207ENST00000492462 TMEM258P61165 79 aa4.14□□□□□ -1.75
MDC1-207ENST00000492462 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
MDC1-207ENST00000492462 UQCR11O14957 56 aa4.09□□□□□ -1.75
MDC1-207ENST00000492462 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
MDC1-207ENST00000492462 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
MDC1-207ENST00000492462 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
MDC1-207ENST00000492462 PCP4P48539 62 aa4.02□□□□□ -1.77
MDC1-207ENST00000492462 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
MDC1-207ENST00000492462 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
MDC1-207ENST00000492462 PSPHP1O15172 72 aa3.96□□□□□ -1.78
MDC1-207ENST00000492462 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
MDC1-207ENST00000492462 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
MDC1-207ENST00000492462 Q1T7F1 81 aa3.9□□□□□ -1.79
MDC1-207ENST00000492462 K7ERS5 55 aa3.89□□□□□ -1.79
MDC1-207ENST00000492462 V9GYY9 64 aa3.89□□□□□ -1.79
MDC1-207ENST00000492462 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
MDC1-207ENST00000492462 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
MDC1-207ENST00000492462 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
MDC1-207ENST00000492462 A6NED7 52 aa3.79□□□□□ -1.8
MDC1-207ENST00000492462 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
MDC1-207ENST00000492462 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
MDC1-207ENST00000492462 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
MDC1-207ENST00000492462 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
MDC1-207ENST00000492462 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
MDC1-207ENST00000492462 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
MDC1-207ENST00000492462 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
MDC1-207ENST00000492462 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
MDC1-207ENST00000492462 ROMO1P60602 79 aa3.67□□□□□ -1.82
MDC1-207ENST00000492462 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
MDC1-207ENST00000492462 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
MDC1-207ENST00000492462 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
MDC1-207ENST00000492462 MT1AP04731 61 aa3.57□□□□□ -1.84
MDC1-207ENST00000492462 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
MDC1-207ENST00000492462 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
MDC1-207ENST00000492462 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
MDC1-207ENST00000492462 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
MDC1-207ENST00000492462 MT3P25713 68 aa3.23□□□□□ -1.89
MDC1-207ENST00000492462 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
MDC1-207ENST00000492462 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
MDC1-207ENST00000492462 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
MDC1-207ENST00000492462 PMAIP1Q13794 54 aa3.02□□□□□ -1.93
MDC1-207ENST00000492462 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
MDC1-207ENST00000492462 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
MDC1-207ENST00000492462 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
MDC1-207ENST00000492462 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
MDC1-207ENST00000492462 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
MDC1-207ENST00000492462 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
MDC1-207ENST00000492462 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
MDC1-207ENST00000492462 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
MDC1-207ENST00000492462 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
MDC1-207ENST00000492462 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
MDC1-207ENST00000492462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
MDC1-207ENST00000492462 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
MDC1-207ENST00000492462 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
MDC1-207ENST00000492462 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
MDC1-207ENST00000492462 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
MDC1-207ENST00000492462 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
MDC1-207ENST00000492462 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
MDC1-207ENST00000492462 PRM1P04553 51 aa1.9□□□□□ -2.11
MDC1-207ENST00000492462 INE1O15225 51 aa1.59□□□□□ -2.15
MDC1-207ENST00000492462 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 91.3 ms