RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 KRTAP2-1Q9BYU5 128 aa9.37□□□□□ -0.91
TTC3-223ENST00000492275 LCE3BQ5TA77 95 aa9.34□□□□□ -0.91
TTC3-223ENST00000492275 KRTAP25-1Q3LHN0 102 aa9.24□□□□□ -0.93
TTC3-223ENST00000492275 MT1GP13640 62 aa9.23□□□□□ -0.93
TTC3-223ENST00000492275 MT1LQ93083 61 aa9.22□□□□□ -0.93
TTC3-223ENST00000492275 KRTAP12-3P60328 96 aa9.11□□□□□ -0.95
TTC3-223ENST00000492275 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
TTC3-223ENST00000492275 MT1MQ8N339 61 aa9.09□□□□□ -0.95
TTC3-223ENST00000492275 CDC42SE1Q9NRR8 79 aa9.06□□□□□ -0.96
TTC3-223ENST00000492275 DSTQ03001 7570 aaKnown RBP9.02□□□□□ -0.97
TTC3-223ENST00000492275 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
TTC3-223ENST00000492275 KRTAP4-3Q9BYR4 195 aa8.91□□□□□ -0.98
TTC3-223ENST00000492275 ROMO1P60602 79 aa8.9□□□□□ -0.98
TTC3-223ENST00000492275 KRTAP4-7Q9BYR0 210 aa8.82□□□□□ -1
TTC3-223ENST00000492275 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
TTC3-223ENST00000492275 KRTAP4-9Q9BYQ8 210 aa8.61□□□□□ -1.03
TTC3-223ENST00000492275 KRTAP19-4Q3LI73 84 aa8.59□□□□□ -1.03
TTC3-223ENST00000492275 LCE4AQ5TA78 99 aa8.53□□□□□ -1.04
TTC3-223ENST00000492275 KRTAP5-4Q6L8H1 288 aa8.47□□□□□ -1.05
TTC3-223ENST00000492275 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
TTC3-223ENST00000492275 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
TTC3-223ENST00000492275 LCE3CQ5T5A8 94 aa8.44□□□□□ -1.06
TTC3-223ENST00000492275 MT4P47944 62 aa8.4□□□□□ -1.06
TTC3-223ENST00000492275 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
TTC3-223ENST00000492275 KRTAP5-5Q701N2 237 aaPredicted RBP8.32□□□□□ -1.08
TTC3-223ENST00000492275 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
TTC3-223ENST00000492275 HMCN1Q96RW7 5635 aa8.21□□□□□ -1.09
TTC3-223ENST00000492275 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
TTC3-223ENST00000492275 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
TTC3-223ENST00000492275 KRTAP12-4P60329 112 aa7.96□□□□□ -1.14
TTC3-223ENST00000492275 KRTAP20-2Q3LI61 65 aa7.96□□□□□ -1.14
TTC3-223ENST00000492275 SPRR5A0A1B0GTR4 108 aa7.95□□□□□ -1.14
TTC3-223ENST00000492275 GPR98Q8WXG9 6306 aa7.92□□□□□ -1.14
TTC3-223ENST00000492275 SYNE1Q8NF91 8797 aaKnown RBP7.86□□□□□ -1.15
TTC3-223ENST00000492275 MT1AP04731 61 aa7.84□□□□□ -1.15
TTC3-223ENST00000492275 AHNAK2Q8IVF2 5795 aa7.83□□□□□ -1.16
TTC3-223ENST00000492275 KRTAP6-1Q3LI64 71 aa7.79□□□□□ -1.16
TTC3-223ENST00000492275 KRTAP5-3Q6L8H2 238 aa7.74□□□□□ -1.17
TTC3-223ENST00000492275 KRTAP5-10Q6L8G5 202 aa7.67□□□□□ -1.18
TTC3-223ENST00000492275 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
TTC3-223ENST00000492275 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
TTC3-223ENST00000492275 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
TTC3-223ENST00000492275 KRTAP5-2Q701N4 177 aa7.49□□□□□ -1.21
TTC3-223ENST00000492275 KRTAP6-2Q3LI66 62 aa7.36□□□□□ -1.23
TTC3-223ENST00000492275 KRTAP5-7Q6L8G8 165 aa7.32□□□□□ -1.24
TTC3-223ENST00000492275 KTN1-AS1Q86SY8 53 aa7.23□□□□□ -1.25
TTC3-223ENST00000492275 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
TTC3-223ENST00000492275 MT3P25713 68 aa7.14□□□□□ -1.27
TTC3-223ENST00000492275 KRTAP5-8O75690 187 aa6.95□□□□□ -1.3
TTC3-223ENST00000492275 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
TTC3-223ENST00000492275 OBSCNQ5VST9 7968 aa6.81□□□□□ -1.32
TTC3-223ENST00000492275 KRTAP5-1Q6L8H4 278 aa6.65□□□□□ -1.34
TTC3-223ENST00000492275 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
TTC3-223ENST00000492275 H3BS24 57 aa6.54□□□□□ -1.36
TTC3-223ENST00000492275 LCE1EQ5T753 118 aa6.48□□□□□ -1.37
TTC3-223ENST00000492275 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
TTC3-223ENST00000492275 MUC5ACP98088 5654 aa6.43□□□□□ -1.38
TTC3-223ENST00000492275 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
TTC3-223ENST00000492275 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
TTC3-223ENST00000492275 AHNAKQ09666 5890 aaKnown RBP6.28□□□□□ -1.4
TTC3-223ENST00000492275 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
TTC3-223ENST00000492275 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
TTC3-223ENST00000492275 LCE1BQ5T7P3 118 aa6.07□□□□□ -1.44
TTC3-223ENST00000492275 LCE1CQ5T751 118 aa6.01□□□□□ -1.45
TTC3-223ENST00000492275 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
TTC3-223ENST00000492275 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
TTC3-223ENST00000492275 KRTAP5-11Q6L8G4 156 aa5.41□□□□□ -1.54
TTC3-223ENST00000492275 NDUFAF8A1L188 74 aa5.4□□□□□ -1.54
TTC3-223ENST00000492275 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
TTC3-223ENST00000492275 KRTAP21-2Q3LI59 83 aa5.14□□□□□ -1.59
TTC3-223ENST00000492275 PHGR1C9JFL3 82 aa4.67□□□□□ -1.66
TTC3-223ENST00000492275 KRTAP4-4Q9BYR3 166 aa4.65□□□□□ -1.67
TTC3-223ENST00000492275 PRM1P04553 51 aa4.58□□□□□ -1.68
TTC3-223ENST00000492275 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
TTC3-223ENST00000492275 INE1O15225 51 aa4.36□□□□□ -1.71
TTC3-223ENST00000492275 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
TTC3-223ENST00000492275 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
TTC3-223ENST00000492275 MUC16Q8WXI7 14507 aa3.04□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms