RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	PRO0628	Q9UI54	55 aa		4.83	□□□□□ -1.64
AGAP3-223	ENST00000492234	KRTAP2-3	P0C7H8	128 aa		4.8	□□□□□ -1.64
AGAP3-223	ENST00000492234	KRTAP2-4	Q9BYR9	128 aa		4.8	□□□□□ -1.64
AGAP3-223	ENST00000492234	PMAIP1	Q13794	54 aa		4.77	□□□□□ -1.65
AGAP3-223	ENST00000492234	KRTAP19-3	Q7Z4W3	81 aa		4.77	□□□□□ -1.65
AGAP3-223	ENST00000492234	PP632	Q6XCG6	107 aa		4.74	□□□□□ -1.65
AGAP3-223	ENST00000492234	LCE5A	Q5TCM9	118 aa		4.73	□□□□□ -1.65
AGAP3-223	ENST00000492234	KRTAP12-3	P60328	96 aa		4.71	□□□□□ -1.66
AGAP3-223	ENST00000492234	MT1G	P13640	62 aa		4.69	□□□□□ -1.66
AGAP3-223	ENST00000492234	MT1L	Q93083	61 aa		4.69	□□□□□ -1.66
AGAP3-223	ENST00000492234	LCE3B	Q5TA77	95 aa		4.68	□□□□□ -1.66
AGAP3-223	ENST00000492234	KRTAP2-2	Q9BYT5	123 aa		4.66	□□□□□ -1.66
AGAP3-223	ENST00000492234	KRTAP2-1	Q9BYU5	128 aa		4.66	□□□□□ -1.66
AGAP3-223	ENST00000492234	MT1M	Q8N339	61 aa		4.61	□□□□□ -1.67
AGAP3-223	ENST00000492234	DST	Q03001	7570 aa	Known RBP	4.6	□□□□□ -1.67
AGAP3-223	ENST00000492234	KRTAP19-4	Q3LI73	84 aa		4.59	□□□□□ -1.67
AGAP3-223	ENST00000492234	KRTAP4-3	Q9BYR4	195 aa		4.52	□□□□□ -1.69
AGAP3-223	ENST00000492234	KRTAP15-1	Q3LI76	137 aa		4.5	□□□□□ -1.69
AGAP3-223	ENST00000492234	KRTAP4-7	Q9BYR0	210 aa		4.5	□□□□□ -1.69
AGAP3-223	ENST00000492234	KTN1-AS1	Q86SY8	53 aa		4.47	□□□□□ -1.69
AGAP3-223	ENST00000492234	SVIP	Q8NHG7	77 aa		4.39	□□□□□ -1.71
AGAP3-223	ENST00000492234	LCE3C	Q5T5A8	94 aa		4.37	□□□□□ -1.71
AGAP3-223	ENST00000492234	KRTAP4-9	Q9BYQ8	210 aa		4.3	□□□□□ -1.72
AGAP3-223	ENST00000492234	LCE4A	Q5TA78	99 aa		4.28	□□□□□ -1.72
AGAP3-223	ENST00000492234	PRAC1	Q96KF2	57 aa		4.27	□□□□□ -1.73
AGAP3-223	ENST00000492234	LOC100996750	A0A140TA64	210 aa		4.25	□□□□□ -1.73
AGAP3-223	ENST00000492234	MT4	P47944	62 aa		4.23	□□□□□ -1.73
AGAP3-223	ENST00000492234	LCE1D	Q5T752	114 aa		4.21	□□□□□ -1.74
AGAP3-223	ENST00000492234	KRTAP5-4	Q6L8H1	288 aa		4.2	□□□□□ -1.74
AGAP3-223	ENST00000492234	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.16	□□□□□ -1.74
AGAP3-223	ENST00000492234	HMCN1	Q96RW7	5635 aa		4.11	□□□□□ -1.75
AGAP3-223	ENST00000492234	KRTAP4-6	Q9BYQ5	205 aa		4.11	□□□□□ -1.75
AGAP3-223	ENST00000492234	KRTAP9-6	A8MVA2	160 aa		4.08	□□□□□ -1.76
AGAP3-223	ENST00000492234	KRTAP12-4	P60329	112 aa		4.06	□□□□□ -1.76
AGAP3-223	ENST00000492234	SYNE1	Q8NF91	8797 aa	Known RBP	4.01	□□□□□ -1.77
AGAP3-223	ENST00000492234	MT1A	P04731	61 aa		3.99	□□□□□ -1.77
AGAP3-223	ENST00000492234	KRTAP20-2	Q3LI61	65 aa		3.98	□□□□□ -1.77
AGAP3-223	ENST00000492234	SPRR5	A0A1B0GTR4	108 aa		3.97	□□□□□ -1.77
AGAP3-223	ENST00000492234	KRTAP6-1	Q3LI64	71 aa		3.96	□□□□□ -1.78
AGAP3-223	ENST00000492234	GPR98	Q8WXG9	6306 aa		3.94	□□□□□ -1.78
AGAP3-223	ENST00000492234	AHNAK2	Q8IVF2	5795 aa		3.92	□□□□□ -1.78
AGAP3-223	ENST00000492234	KRTAP9-4	Q9BYQ2	154 aa		3.85	□□□□□ -1.79
AGAP3-223	ENST00000492234	LUZP6	Q538Z0	58 aa		3.84	□□□□□ -1.79
AGAP3-223	ENST00000492234	KRTAP5-3	Q6L8H2	238 aa		3.83	□□□□□ -1.8
AGAP3-223	ENST00000492234	KRTAP6-2	Q3LI66	62 aa		3.75	□□□□□ -1.81
AGAP3-223	ENST00000492234	KRTAP5-10	Q6L8G5	202 aa		3.74	□□□□□ -1.81
AGAP3-223	ENST00000492234	KRTAP5-2	Q701N4	177 aa		3.72	□□□□□ -1.81
AGAP3-223	ENST00000492234	MT3	P25713	68 aa		3.66	□□□□□ -1.82
AGAP3-223	ENST00000492234	KRTAP4-11	Q9BYQ6	195 aa		3.58	□□□□□ -1.84
AGAP3-223	ENST00000492234	KRTAP5-7	Q6L8G8	165 aa		3.57	□□□□□ -1.84
AGAP3-223	ENST00000492234	OBSCN	Q5VST9	7968 aa		3.49	□□□□□ -1.85
AGAP3-223	ENST00000492234	KRTAP5-8	O75690	187 aa		3.43	□□□□□ -1.86
AGAP3-223	ENST00000492234	NDUFAF8	A1L188	74 aa		3.34	□□□□□ -1.87
AGAP3-223	ENST00000492234	KRTAP5-1	Q6L8H4	278 aa		3.3	□□□□□ -1.88
AGAP3-223	ENST00000492234	LCE1E	Q5T753	118 aa		3.26	□□□□□ -1.89
AGAP3-223	ENST00000492234	KRTAP9-9	Q9BYP9	154 aa		3.26	□□□□□ -1.89
AGAP3-223	ENST00000492234	MUC5AC	P98088	5654 aa		3.23	□□□□□ -1.89
AGAP3-223	ENST00000492234	LCE3D	Q9BYE3	92 aa		3.22	□□□□□ -1.89
AGAP3-223	ENST00000492234	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.15	□□□□□ -1.9
AGAP3-223	ENST00000492234	AHNAK	Q09666	5890 aa	Known RBP	3.14	□□□□□ -1.91
AGAP3-223	ENST00000492234	LCE1B	Q5T7P3	118 aa		3.13	□□□□□ -1.91
AGAP3-223	ENST00000492234		A0A0A0MQY5	61 aa		3.08	□□□□□ -1.92
AGAP3-223	ENST00000492234	LCE3E	Q5T5B0	92 aa		3.07	□□□□□ -1.92
AGAP3-223	ENST00000492234	KRTAP4-2	Q9BYR5	136 aa		3.05	□□□□□ -1.92
AGAP3-223	ENST00000492234		H3BS24	57 aa		3.03	□□□□□ -1.92
AGAP3-223	ENST00000492234	LCE1C	Q5T751	118 aa		3.03	□□□□□ -1.92
AGAP3-223	ENST00000492234	INE1	O15225	51 aa		2.97	□□□□□ -1.93
AGAP3-223	ENST00000492234	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.76	□□□□□ -1.97
AGAP3-223	ENST00000492234	KRTAP4-12	Q9BQ66	201 aa		2.74	□□□□□ -1.97
AGAP3-223	ENST00000492234	KRTAP5-11	Q6L8G4	156 aa		2.71	□□□□□ -1.98
AGAP3-223	ENST00000492234	KRTAP21-2	Q3LI59	83 aa		2.58	□□□□□ -2
AGAP3-223	ENST00000492234	LCE1F	Q5T754	118 aa		2.58	□□□□□ -2
AGAP3-223	ENST00000492234	PRM1	P04553	51 aa		2.46	□□□□□ -2.02
AGAP3-223	ENST00000492234	KRTAP4-4	Q9BYR3	166 aa		2.39	□□□□□ -2.03
AGAP3-223	ENST00000492234	PHGR1	C9JFL3	82 aa		2.34	□□□□□ -2.03
AGAP3-223	ENST00000492234	MUC19	Q7Z5P9	8384 aa		2.13	□□□□□ -2.07
AGAP3-223	ENST00000492234	KRTAP21-1	Q3LI58	79 aa		1.65	□□□□□ -2.15
AGAP3-223	ENST00000492234	MUC16	Q8WXI7	14507 aa		1.5	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms