RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
NELFCD-211ENST00000492016 NEBP20929 6669 aa5.71□□□□□ -1.5
NELFCD-211ENST00000492016 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
NELFCD-211ENST00000492016 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
NELFCD-211ENST00000492016 MT1GP13640 62 aa5.66□□□□□ -1.5
NELFCD-211ENST00000492016 MT1LQ93083 61 aa5.66□□□□□ -1.5
NELFCD-211ENST00000492016 SPRR2DP22532 72 aa5.64□□□□□ -1.51
NELFCD-211ENST00000492016 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
NELFCD-211ENST00000492016 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
NELFCD-211ENST00000492016 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
NELFCD-211ENST00000492016 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
NELFCD-211ENST00000492016 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
NELFCD-211ENST00000492016 MT1MQ8N339 61 aa5.52□□□□□ -1.53
NELFCD-211ENST00000492016 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
NELFCD-211ENST00000492016 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
NELFCD-211ENST00000492016 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
NELFCD-211ENST00000492016 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
NELFCD-211ENST00000492016 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
NELFCD-211ENST00000492016 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
NELFCD-211ENST00000492016 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
NELFCD-211ENST00000492016 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
NELFCD-211ENST00000492016 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
NELFCD-211ENST00000492016 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
NELFCD-211ENST00000492016 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
NELFCD-211ENST00000492016 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
NELFCD-211ENST00000492016 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
NELFCD-211ENST00000492016 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
NELFCD-211ENST00000492016 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
NELFCD-211ENST00000492016 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
NELFCD-211ENST00000492016 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
NELFCD-211ENST00000492016 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
NELFCD-211ENST00000492016 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
NELFCD-211ENST00000492016 MT4P47944 62 aa4.85□□□□□ -1.63
NELFCD-211ENST00000492016 MT1AP04731 61 aa4.84□□□□□ -1.63
NELFCD-211ENST00000492016 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
NELFCD-211ENST00000492016 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
NELFCD-211ENST00000492016 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
NELFCD-211ENST00000492016 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
NELFCD-211ENST00000492016 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
NELFCD-211ENST00000492016 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
NELFCD-211ENST00000492016 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
NELFCD-211ENST00000492016 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
NELFCD-211ENST00000492016 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
NELFCD-211ENST00000492016 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
NELFCD-211ENST00000492016 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
NELFCD-211ENST00000492016 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
NELFCD-211ENST00000492016 MT3P25713 68 aa4.42□□□□□ -1.7
NELFCD-211ENST00000492016 H3BS24 57 aa4.33□□□□□ -1.72
NELFCD-211ENST00000492016 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
NELFCD-211ENST00000492016 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
NELFCD-211ENST00000492016 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
NELFCD-211ENST00000492016 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
NELFCD-211ENST00000492016 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
NELFCD-211ENST00000492016 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
NELFCD-211ENST00000492016 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
NELFCD-211ENST00000492016 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
NELFCD-211ENST00000492016 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
NELFCD-211ENST00000492016 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
NELFCD-211ENST00000492016 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
NELFCD-211ENST00000492016 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
NELFCD-211ENST00000492016 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
NELFCD-211ENST00000492016 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
NELFCD-211ENST00000492016 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
NELFCD-211ENST00000492016 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
NELFCD-211ENST00000492016 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
NELFCD-211ENST00000492016 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
NELFCD-211ENST00000492016 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
NELFCD-211ENST00000492016 INE1O15225 51 aa3.4□□□□□ -1.87
NELFCD-211ENST00000492016 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
NELFCD-211ENST00000492016 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
NELFCD-211ENST00000492016 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
NELFCD-211ENST00000492016 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
NELFCD-211ENST00000492016 PRM1P04553 51 aa3.06□□□□□ -1.92
NELFCD-211ENST00000492016 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
NELFCD-211ENST00000492016 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
NELFCD-211ENST00000492016 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
NELFCD-211ENST00000492016 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
NELFCD-211ENST00000492016 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms