RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
CCDC6-202ENST00000491922 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
CCDC6-202ENST00000491922 KRTAP10-5P60370 271 aa2.45□□□□□ -2.02
CCDC6-202ENST00000491922 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
CCDC6-202ENST00000491922 MT1XP80297 61 aa2.42□□□□□ -2.02
CCDC6-202ENST00000491922 M0R2T5 61 aa2.4□□□□□ -2.03
CCDC6-202ENST00000491922 MT1FP04733 61 aa2.39□□□□□ -2.03
CCDC6-202ENST00000491922 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
CCDC6-202ENST00000491922 MT2AP02795 61 aa2.38□□□□□ -2.03
CCDC6-202ENST00000491922 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
CCDC6-202ENST00000491922 NEBP20929 6669 aa2.37□□□□□ -2.03
CCDC6-202ENST00000491922 MT1BP07438 61 aa2.37□□□□□ -2.03
CCDC6-202ENST00000491922 USH2AO75445 5202 aa2.36□□□□□ -2.03
CCDC6-202ENST00000491922 KRTAP10-7P60409 375 aaPredicted RBP2.36□□□□□ -2.03
CCDC6-202ENST00000491922 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
CCDC6-202ENST00000491922 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
CCDC6-202ENST00000491922 MT1HP80294 61 aa2.35□□□□□ -2.03
CCDC6-202ENST00000491922 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
CCDC6-202ENST00000491922 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
CCDC6-202ENST00000491922 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
CCDC6-202ENST00000491922 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
CCDC6-202ENST00000491922 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
CCDC6-202ENST00000491922 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
CCDC6-202ENST00000491922 MT3P25713 68 aa2.22□□□□□ -2.05
CCDC6-202ENST00000491922 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
CCDC6-202ENST00000491922 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
CCDC6-202ENST00000491922 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
CCDC6-202ENST00000491922 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
CCDC6-202ENST00000491922 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
CCDC6-202ENST00000491922 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CCDC6-202ENST00000491922 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
CCDC6-202ENST00000491922 MT1LQ93083 61 aa2.12□□□□□ -2.07
CCDC6-202ENST00000491922 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
CCDC6-202ENST00000491922 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
CCDC6-202ENST00000491922 MT1EP04732 61 aa2.08□□□□□ -2.08
CCDC6-202ENST00000491922 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
CCDC6-202ENST00000491922 KMT2DO14686 5537 aa2.06□□□□□ -2.08
CCDC6-202ENST00000491922 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CCDC6-202ENST00000491922 LCE1EQ5T753 118 aa2□□□□□ -2.09
CCDC6-202ENST00000491922 MT1GP13640 62 aa1.98□□□□□ -2.09
CCDC6-202ENST00000491922 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
CCDC6-202ENST00000491922 SPRR2EP22531 72 aa1.96□□□□□ -2.1
CCDC6-202ENST00000491922 SPRR2BP35325 72 aa1.96□□□□□ -2.1
CCDC6-202ENST00000491922 SPRR2AP35326 72 aa1.96□□□□□ -2.1
CCDC6-202ENST00000491922 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CCDC6-202ENST00000491922 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
CCDC6-202ENST00000491922 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
CCDC6-202ENST00000491922 MT1AP04731 61 aa1.93□□□□□ -2.1
CCDC6-202ENST00000491922 MT1MQ8N339 61 aa1.93□□□□□ -2.1
CCDC6-202ENST00000491922 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
CCDC6-202ENST00000491922 SPRR2DP22532 72 aa1.9□□□□□ -2.1
CCDC6-202ENST00000491922 PRM1P04553 51 aa1.9□□□□□ -2.11
CCDC6-202ENST00000491922 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
CCDC6-202ENST00000491922 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
CCDC6-202ENST00000491922 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
CCDC6-202ENST00000491922 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
CCDC6-202ENST00000491922 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
CCDC6-202ENST00000491922 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
CCDC6-202ENST00000491922 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
CCDC6-202ENST00000491922 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
CCDC6-202ENST00000491922 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
CCDC6-202ENST00000491922 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
CCDC6-202ENST00000491922 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
CCDC6-202ENST00000491922 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
CCDC6-202ENST00000491922 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
CCDC6-202ENST00000491922 MT4P47944 62 aa1.66□□□□□ -2.14
CCDC6-202ENST00000491922 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
CCDC6-202ENST00000491922 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
CCDC6-202ENST00000491922 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
CCDC6-202ENST00000491922 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
CCDC6-202ENST00000491922 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
CCDC6-202ENST00000491922 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
CCDC6-202ENST00000491922 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
CCDC6-202ENST00000491922 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CCDC6-202ENST00000491922 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
CCDC6-202ENST00000491922 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
CCDC6-202ENST00000491922 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CCDC6-202ENST00000491922 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 66.7 ms