RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
CDC42SE1-205ENST00000491825 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
CDC42SE1-205ENST00000491825 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
CDC42SE1-205ENST00000491825 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
CDC42SE1-205ENST00000491825 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
CDC42SE1-205ENST00000491825 MT1EP04732 61 aa5.55□□□□□ -1.52
CDC42SE1-205ENST00000491825 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
CDC42SE1-205ENST00000491825 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
CDC42SE1-205ENST00000491825 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CDC42SE1-205ENST00000491825 ROMO1P60602 79 aa5.46□□□□□ -1.54
CDC42SE1-205ENST00000491825 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
CDC42SE1-205ENST00000491825 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CDC42SE1-205ENST00000491825 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
CDC42SE1-205ENST00000491825 MT1GP13640 62 aa5.36□□□□□ -1.55
CDC42SE1-205ENST00000491825 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
CDC42SE1-205ENST00000491825 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
CDC42SE1-205ENST00000491825 MT1LQ93083 61 aa5.34□□□□□ -1.55
CDC42SE1-205ENST00000491825 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
CDC42SE1-205ENST00000491825 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
CDC42SE1-205ENST00000491825 MT1MQ8N339 61 aa5.29□□□□□ -1.56
CDC42SE1-205ENST00000491825 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
CDC42SE1-205ENST00000491825 MT4P47944 62 aa5.23□□□□□ -1.57
CDC42SE1-205ENST00000491825 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
CDC42SE1-205ENST00000491825 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
CDC42SE1-205ENST00000491825 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
CDC42SE1-205ENST00000491825 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
CDC42SE1-205ENST00000491825 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
CDC42SE1-205ENST00000491825 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
CDC42SE1-205ENST00000491825 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
CDC42SE1-205ENST00000491825 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
CDC42SE1-205ENST00000491825 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CDC42SE1-205ENST00000491825 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
CDC42SE1-205ENST00000491825 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CDC42SE1-205ENST00000491825 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
CDC42SE1-205ENST00000491825 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
CDC42SE1-205ENST00000491825 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
CDC42SE1-205ENST00000491825 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
CDC42SE1-205ENST00000491825 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
CDC42SE1-205ENST00000491825 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
CDC42SE1-205ENST00000491825 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
CDC42SE1-205ENST00000491825 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
CDC42SE1-205ENST00000491825 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
CDC42SE1-205ENST00000491825 H3BS24 57 aa4.55□□□□□ -1.68
CDC42SE1-205ENST00000491825 MT1AP04731 61 aa4.55□□□□□ -1.68
CDC42SE1-205ENST00000491825 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
CDC42SE1-205ENST00000491825 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
CDC42SE1-205ENST00000491825 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
CDC42SE1-205ENST00000491825 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
CDC42SE1-205ENST00000491825 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
CDC42SE1-205ENST00000491825 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
CDC42SE1-205ENST00000491825 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
CDC42SE1-205ENST00000491825 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CDC42SE1-205ENST00000491825 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
CDC42SE1-205ENST00000491825 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
CDC42SE1-205ENST00000491825 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
CDC42SE1-205ENST00000491825 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
CDC42SE1-205ENST00000491825 MT3P25713 68 aa4.14□□□□□ -1.75
CDC42SE1-205ENST00000491825 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CDC42SE1-205ENST00000491825 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
CDC42SE1-205ENST00000491825 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CDC42SE1-205ENST00000491825 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
CDC42SE1-205ENST00000491825 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
CDC42SE1-205ENST00000491825 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CDC42SE1-205ENST00000491825 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CDC42SE1-205ENST00000491825 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
CDC42SE1-205ENST00000491825 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
CDC42SE1-205ENST00000491825 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CDC42SE1-205ENST00000491825 INE1O15225 51 aa3.41□□□□□ -1.86
CDC42SE1-205ENST00000491825 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
CDC42SE1-205ENST00000491825 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
CDC42SE1-205ENST00000491825 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CDC42SE1-205ENST00000491825 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
CDC42SE1-205ENST00000491825 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CDC42SE1-205ENST00000491825 PRM1P04553 51 aa2.79□□□□□ -1.96
CDC42SE1-205ENST00000491825 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
CDC42SE1-205ENST00000491825 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
CDC42SE1-205ENST00000491825 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CDC42SE1-205ENST00000491825 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 113.2 ms