RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
VPS45-209ENST00000491789 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
VPS45-209ENST00000491789 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
VPS45-209ENST00000491789 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
VPS45-209ENST00000491789 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
VPS45-209ENST00000491789 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
VPS45-209ENST00000491789 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
VPS45-209ENST00000491789 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
VPS45-209ENST00000491789 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
VPS45-209ENST00000491789 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
VPS45-209ENST00000491789 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
VPS45-209ENST00000491789 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
VPS45-209ENST00000491789 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.91
VPS45-209ENST00000491789 TNP1P09430 55 aa3.14□□□□□ -1.91
VPS45-209ENST00000491789 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
VPS45-209ENST00000491789 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
VPS45-209ENST00000491789 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
VPS45-209ENST00000491789 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
VPS45-209ENST00000491789 MT1BP07438 61 aa3.04□□□□□ -1.92
VPS45-209ENST00000491789 PRO2289Q9P1D8 64 aa3.04□□□□□ -1.92
VPS45-209ENST00000491789 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
VPS45-209ENST00000491789 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
VPS45-209ENST00000491789 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
VPS45-209ENST00000491789 MT1XP80297 61 aa2.97□□□□□ -1.93
VPS45-209ENST00000491789 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
VPS45-209ENST00000491789 NEBP20929 6669 aa2.95□□□□□ -1.94
VPS45-209ENST00000491789 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
VPS45-209ENST00000491789 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
VPS45-209ENST00000491789 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
VPS45-209ENST00000491789 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
VPS45-209ENST00000491789 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
VPS45-209ENST00000491789 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
VPS45-209ENST00000491789 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
VPS45-209ENST00000491789 KMT2DO14686 5537 aa2.84□□□□□ -1.96
VPS45-209ENST00000491789 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
VPS45-209ENST00000491789 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
VPS45-209ENST00000491789 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
VPS45-209ENST00000491789 SPRR2EP22531 72 aa2.79□□□□□ -1.96
VPS45-209ENST00000491789 SPRR2BP35325 72 aa2.79□□□□□ -1.96
VPS45-209ENST00000491789 SPRR2AP35326 72 aa2.79□□□□□ -1.96
VPS45-209ENST00000491789 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
VPS45-209ENST00000491789 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
VPS45-209ENST00000491789 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
VPS45-209ENST00000491789 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
VPS45-209ENST00000491789 SPRR2DP22532 72 aa2.69□□□□□ -1.98
VPS45-209ENST00000491789 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
VPS45-209ENST00000491789 MT1EP04732 61 aa2.62□□□□□ -1.99
VPS45-209ENST00000491789 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
VPS45-209ENST00000491789 MT1LQ93083 61 aa2.58□□□□□ -2
VPS45-209ENST00000491789 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
VPS45-209ENST00000491789 MT1GP13640 62 aa2.51□□□□□ -2.01
VPS45-209ENST00000491789 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
VPS45-209ENST00000491789 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
VPS45-209ENST00000491789 MT1MQ8N339 61 aa2.45□□□□□ -2.02
VPS45-209ENST00000491789 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
VPS45-209ENST00000491789 INE1O15225 51 aa2.4□□□□□ -2.03
VPS45-209ENST00000491789 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
VPS45-209ENST00000491789 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
VPS45-209ENST00000491789 MT4P47944 62 aa2.38□□□□□ -2.03
VPS45-209ENST00000491789 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
VPS45-209ENST00000491789 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
VPS45-209ENST00000491789 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
VPS45-209ENST00000491789 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
VPS45-209ENST00000491789 MT1AP04731 61 aa2.22□□□□□ -2.05
VPS45-209ENST00000491789 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
VPS45-209ENST00000491789 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
VPS45-209ENST00000491789 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
VPS45-209ENST00000491789 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
VPS45-209ENST00000491789 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
VPS45-209ENST00000491789 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
VPS45-209ENST00000491789 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
VPS45-209ENST00000491789 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
VPS45-209ENST00000491789 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
VPS45-209ENST00000491789 PRM1P04553 51 aa1.75□□□□□ -2.13
VPS45-209ENST00000491789 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
VPS45-209ENST00000491789 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
VPS45-209ENST00000491789 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
VPS45-209ENST00000491789 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 1487.8 ms