RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
NUP188-208ENST00000491502 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
NUP188-208ENST00000491502 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
NUP188-208ENST00000491502 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
NUP188-208ENST00000491502 SPRR2DP22532 72 aa5.06□□□□□ -1.6
NUP188-208ENST00000491502 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
NUP188-208ENST00000491502 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
NUP188-208ENST00000491502 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
NUP188-208ENST00000491502 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
NUP188-208ENST00000491502 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
NUP188-208ENST00000491502 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
NUP188-208ENST00000491502 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
NUP188-208ENST00000491502 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
NUP188-208ENST00000491502 MT1EP04732 61 aa4.88□□□□□ -1.63
NUP188-208ENST00000491502 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
NUP188-208ENST00000491502 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
NUP188-208ENST00000491502 MT1GP13640 62 aa4.77□□□□□ -1.65
NUP188-208ENST00000491502 MT1LQ93083 61 aa4.77□□□□□ -1.65
NUP188-208ENST00000491502 H3BS24 57 aa4.76□□□□□ -1.65
NUP188-208ENST00000491502 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
NUP188-208ENST00000491502 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
NUP188-208ENST00000491502 MT1MQ8N339 61 aa4.64□□□□□ -1.67
NUP188-208ENST00000491502 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
NUP188-208ENST00000491502 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
NUP188-208ENST00000491502 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
NUP188-208ENST00000491502 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
NUP188-208ENST00000491502 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
NUP188-208ENST00000491502 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
NUP188-208ENST00000491502 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
NUP188-208ENST00000491502 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
NUP188-208ENST00000491502 MT4P47944 62 aa4.39□□□□□ -1.71
NUP188-208ENST00000491502 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
NUP188-208ENST00000491502 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
NUP188-208ENST00000491502 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
NUP188-208ENST00000491502 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
NUP188-208ENST00000491502 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
NUP188-208ENST00000491502 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
NUP188-208ENST00000491502 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
NUP188-208ENST00000491502 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
NUP188-208ENST00000491502 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
NUP188-208ENST00000491502 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
NUP188-208ENST00000491502 MT1AP04731 61 aa4.09□□□□□ -1.75
NUP188-208ENST00000491502 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
NUP188-208ENST00000491502 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
NUP188-208ENST00000491502 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
NUP188-208ENST00000491502 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
NUP188-208ENST00000491502 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
NUP188-208ENST00000491502 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
NUP188-208ENST00000491502 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
NUP188-208ENST00000491502 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
NUP188-208ENST00000491502 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
NUP188-208ENST00000491502 MT3P25713 68 aa3.76□□□□□ -1.81
NUP188-208ENST00000491502 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
NUP188-208ENST00000491502 INE1O15225 51 aa3.67□□□□□ -1.82
NUP188-208ENST00000491502 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
NUP188-208ENST00000491502 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
NUP188-208ENST00000491502 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
NUP188-208ENST00000491502 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
NUP188-208ENST00000491502 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
NUP188-208ENST00000491502 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
NUP188-208ENST00000491502 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
NUP188-208ENST00000491502 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
NUP188-208ENST00000491502 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
NUP188-208ENST00000491502 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
NUP188-208ENST00000491502 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
NUP188-208ENST00000491502 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
NUP188-208ENST00000491502 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
NUP188-208ENST00000491502 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
NUP188-208ENST00000491502 PRM1P04553 51 aa2.93□□□□□ -1.94
NUP188-208ENST00000491502 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
NUP188-208ENST00000491502 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
NUP188-208ENST00000491502 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
NUP188-208ENST00000491502 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
NUP188-208ENST00000491502 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
NUP188-208ENST00000491502 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
NUP188-208ENST00000491502 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
NUP188-208ENST00000491502 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NUP188-208ENST00000491502 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms