RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.83
CNOT4-210ENST00000491203 SPATA8Q6RVD6 105 aa3.65□□□□□ -1.83
CNOT4-210ENST00000491203 UQCR11O14957 56 aa3.64□□□□□ -1.83
CNOT4-210ENST00000491203 A0A0D9SG42 100 aa3.62□□□□□ -1.83
CNOT4-210ENST00000491203 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
CNOT4-210ENST00000491203 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
CNOT4-210ENST00000491203 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
CNOT4-210ENST00000491203 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
CNOT4-210ENST00000491203 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
CNOT4-210ENST00000491203 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CNOT4-210ENST00000491203 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
CNOT4-210ENST00000491203 MT1XP80297 61 aa3.53□□□□□ -1.84
CNOT4-210ENST00000491203 K7ERS5 55 aa3.51□□□□□ -1.85
CNOT4-210ENST00000491203 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
CNOT4-210ENST00000491203 ROMO1P60602 79 aa3.5□□□□□ -1.85
CNOT4-210ENST00000491203 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
CNOT4-210ENST00000491203 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CNOT4-210ENST00000491203 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
CNOT4-210ENST00000491203 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
CNOT4-210ENST00000491203 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CNOT4-210ENST00000491203 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CNOT4-210ENST00000491203 TNP1P09430 55 aa3.32□□□□□ -1.88
CNOT4-210ENST00000491203 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
CNOT4-210ENST00000491203 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
CNOT4-210ENST00000491203 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
CNOT4-210ENST00000491203 KMT2DO14686 5537 aa3.27□□□□□ -1.89
CNOT4-210ENST00000491203 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
CNOT4-210ENST00000491203 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CNOT4-210ENST00000491203 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
CNOT4-210ENST00000491203 NEBP20929 6669 aa3.21□□□□□ -1.9
CNOT4-210ENST00000491203 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.9
CNOT4-210ENST00000491203 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
CNOT4-210ENST00000491203 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
CNOT4-210ENST00000491203 SPRR2EP22531 72 aa3.13□□□□□ -1.91
CNOT4-210ENST00000491203 SPRR2BP35325 72 aa3.13□□□□□ -1.91
CNOT4-210ENST00000491203 SPRR2AP35326 72 aa3.13□□□□□ -1.91
CNOT4-210ENST00000491203 MT1EP04732 61 aa3.12□□□□□ -1.91
CNOT4-210ENST00000491203 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
CNOT4-210ENST00000491203 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
CNOT4-210ENST00000491203 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
CNOT4-210ENST00000491203 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
CNOT4-210ENST00000491203 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
CNOT4-210ENST00000491203 SPRR2DP22532 72 aa3.02□□□□□ -1.93
CNOT4-210ENST00000491203 MT1LQ93083 61 aa3.02□□□□□ -1.93
CNOT4-210ENST00000491203 MT1GP13640 62 aa3□□□□□ -1.93
CNOT4-210ENST00000491203 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
CNOT4-210ENST00000491203 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
CNOT4-210ENST00000491203 MT1MQ8N339 61 aa2.95□□□□□ -1.94
CNOT4-210ENST00000491203 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
CNOT4-210ENST00000491203 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CNOT4-210ENST00000491203 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CNOT4-210ENST00000491203 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
CNOT4-210ENST00000491203 INE1O15225 51 aa2.81□□□□□ -1.96
CNOT4-210ENST00000491203 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
CNOT4-210ENST00000491203 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CNOT4-210ENST00000491203 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CNOT4-210ENST00000491203 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
CNOT4-210ENST00000491203 MT4P47944 62 aa2.62□□□□□ -1.99
CNOT4-210ENST00000491203 MT1AP04731 61 aa2.58□□□□□ -2
CNOT4-210ENST00000491203 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CNOT4-210ENST00000491203 KRTAP12-4P60329 112 aa2.57□□□□□ -2
CNOT4-210ENST00000491203 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
CNOT4-210ENST00000491203 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
CNOT4-210ENST00000491203 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CNOT4-210ENST00000491203 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CNOT4-210ENST00000491203 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
CNOT4-210ENST00000491203 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
CNOT4-210ENST00000491203 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
CNOT4-210ENST00000491203 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
CNOT4-210ENST00000491203 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
CNOT4-210ENST00000491203 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
CNOT4-210ENST00000491203 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CNOT4-210ENST00000491203 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
CNOT4-210ENST00000491203 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CNOT4-210ENST00000491203 PRM1P04553 51 aa1.72□□□□□ -2.13
CNOT4-210ENST00000491203 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CNOT4-210ENST00000491203 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CNOT4-210ENST00000491203 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 133.5 ms