RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TNP1P09430 55 aa6.35□□□□□ -1.39
HMGN1-219ENST00000491183 GPR98Q8WXG9 6306 aa6.32□□□□□ -1.4
HMGN1-219ENST00000491183 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
HMGN1-219ENST00000491183 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
HMGN1-219ENST00000491183 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
HMGN1-219ENST00000491183 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
HMGN1-219ENST00000491183 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-219ENST00000491183 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
HMGN1-219ENST00000491183 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
HMGN1-219ENST00000491183 MT4P47944 62 aa6.22□□□□□ -1.41
HMGN1-219ENST00000491183 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
HMGN1-219ENST00000491183 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
HMGN1-219ENST00000491183 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
HMGN1-219ENST00000491183 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
HMGN1-219ENST00000491183 UQCR11O14957 56 aa6.09□□□□□ -1.43
HMGN1-219ENST00000491183 TMEM258P61165 79 aa6.06□□□□□ -1.44
HMGN1-219ENST00000491183 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
HMGN1-219ENST00000491183 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
HMGN1-219ENST00000491183 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
HMGN1-219ENST00000491183 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
HMGN1-219ENST00000491183 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-219ENST00000491183 K7ERS5 55 aa5.81□□□□□ -1.48
HMGN1-219ENST00000491183 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
HMGN1-219ENST00000491183 PSPHP1O15172 72 aa5.79□□□□□ -1.48
HMGN1-219ENST00000491183 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
HMGN1-219ENST00000491183 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
HMGN1-219ENST00000491183 V9GYY9 64 aa5.75□□□□□ -1.49
HMGN1-219ENST00000491183 Q1T7F1 81 aa5.74□□□□□ -1.49
HMGN1-219ENST00000491183 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
HMGN1-219ENST00000491183 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
HMGN1-219ENST00000491183 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
HMGN1-219ENST00000491183 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
HMGN1-219ENST00000491183 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
HMGN1-219ENST00000491183 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
HMGN1-219ENST00000491183 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
HMGN1-219ENST00000491183 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
HMGN1-219ENST00000491183 A6NED7 52 aa5.55□□□□□ -1.52
HMGN1-219ENST00000491183 CDC42SE1Q9NRR8 79 aa5.51□□□□□ -1.53
HMGN1-219ENST00000491183 MT1AP04731 61 aa5.44□□□□□ -1.54
HMGN1-219ENST00000491183 ROMO1P60602 79 aa5.44□□□□□ -1.54
HMGN1-219ENST00000491183 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
HMGN1-219ENST00000491183 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
HMGN1-219ENST00000491183 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
HMGN1-219ENST00000491183 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
HMGN1-219ENST00000491183 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
HMGN1-219ENST00000491183 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
HMGN1-219ENST00000491183 PCP4P48539 62 aa5.1□□□□□ -1.59
HMGN1-219ENST00000491183 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
HMGN1-219ENST00000491183 MT3P25713 68 aa4.97□□□□□ -1.61
HMGN1-219ENST00000491183 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
HMGN1-219ENST00000491183 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
HMGN1-219ENST00000491183 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
HMGN1-219ENST00000491183 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
HMGN1-219ENST00000491183 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
HMGN1-219ENST00000491183 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
HMGN1-219ENST00000491183 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
HMGN1-219ENST00000491183 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
HMGN1-219ENST00000491183 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
HMGN1-219ENST00000491183 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
HMGN1-219ENST00000491183 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
HMGN1-219ENST00000491183 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
HMGN1-219ENST00000491183 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
HMGN1-219ENST00000491183 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
HMGN1-219ENST00000491183 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
HMGN1-219ENST00000491183 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
HMGN1-219ENST00000491183 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
HMGN1-219ENST00000491183 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
HMGN1-219ENST00000491183 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
HMGN1-219ENST00000491183 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
HMGN1-219ENST00000491183 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
HMGN1-219ENST00000491183 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
HMGN1-219ENST00000491183 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
HMGN1-219ENST00000491183 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
HMGN1-219ENST00000491183 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HMGN1-219ENST00000491183 PRM1P04553 51 aa2.79□□□□□ -1.96
HMGN1-219ENST00000491183 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
HMGN1-219ENST00000491183 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
HMGN1-219ENST00000491183 INE1O15225 51 aa2.09□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms