RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
CLIP2-208ENST00000491075 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
CLIP2-208ENST00000491075 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
CLIP2-208ENST00000491075 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
CLIP2-208ENST00000491075 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
CLIP2-208ENST00000491075 SERP2Q8N6R1 65 aa6.68□□□□□ -1.34
CLIP2-208ENST00000491075 A8MU10 97 aa6.67□□□□□ -1.34
CLIP2-208ENST00000491075 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
CLIP2-208ENST00000491075 A0A1B0GU69 56 aa6.57□□□□□ -1.36
CLIP2-208ENST00000491075 K7ERU9 68 aa6.56□□□□□ -1.36
CLIP2-208ENST00000491075 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
CLIP2-208ENST00000491075 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
CLIP2-208ENST00000491075 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
CLIP2-208ENST00000491075 H7BZZ5 65 aa6.35□□□□□ -1.39
CLIP2-208ENST00000491075 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CLIP2-208ENST00000491075 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
CLIP2-208ENST00000491075 MUC5ACP98088 5654 aa6.32□□□□□ -1.4
CLIP2-208ENST00000491075 KRTAP5-8O75690 187 aa6.3□□□□□ -1.4
CLIP2-208ENST00000491075 COX7CP15954 63 aa6.3□□□□□ -1.4
CLIP2-208ENST00000491075 MUC5BQ9HC84 5762 aaPredicted RBP6.26□□□□□ -1.41
CLIP2-208ENST00000491075 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
CLIP2-208ENST00000491075 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
CLIP2-208ENST00000491075 MT1AP04731 61 aa6.2□□□□□ -1.42
CLIP2-208ENST00000491075 KRTAP6-1Q3LI64 71 aa6.18□□□□□ -1.42
CLIP2-208ENST00000491075 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
CLIP2-208ENST00000491075 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
CLIP2-208ENST00000491075 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
CLIP2-208ENST00000491075 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
CLIP2-208ENST00000491075 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
CLIP2-208ENST00000491075 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.45
CLIP2-208ENST00000491075 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
CLIP2-208ENST00000491075 UQCR11O14957 56 aa5.99□□□□□ -1.45
CLIP2-208ENST00000491075 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
CLIP2-208ENST00000491075 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
CLIP2-208ENST00000491075 K7ERS5 55 aa5.82□□□□□ -1.48
CLIP2-208ENST00000491075 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
CLIP2-208ENST00000491075 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
CLIP2-208ENST00000491075 MIR22HGQ0VDD5 57 aa5.79□□□□□ -1.48
CLIP2-208ENST00000491075 ANAPC13Q9BS18 74 aa5.76□□□□□ -1.49
CLIP2-208ENST00000491075 MT3P25713 68 aa5.7□□□□□ -1.5
CLIP2-208ENST00000491075 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
CLIP2-208ENST00000491075 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
CLIP2-208ENST00000491075 TMEM258P61165 79 aa5.44□□□□□ -1.54
CLIP2-208ENST00000491075 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
CLIP2-208ENST00000491075 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
CLIP2-208ENST00000491075 Q1T7F1 81 aa5.36□□□□□ -1.55
CLIP2-208ENST00000491075 PSPHP1O15172 72 aa5.34□□□□□ -1.55
CLIP2-208ENST00000491075 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
CLIP2-208ENST00000491075 V9GYY9 64 aa5.29□□□□□ -1.56
CLIP2-208ENST00000491075 ROMO1P60602 79 aa5.28□□□□□ -1.56
CLIP2-208ENST00000491075 PCP4P48539 62 aa5.23□□□□□ -1.57
CLIP2-208ENST00000491075 A6NED7 52 aa5.15□□□□□ -1.59
CLIP2-208ENST00000491075 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
CLIP2-208ENST00000491075 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
CLIP2-208ENST00000491075 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
CLIP2-208ENST00000491075 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
CLIP2-208ENST00000491075 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
CLIP2-208ENST00000491075 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
CLIP2-208ENST00000491075 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
CLIP2-208ENST00000491075 PHGR1C9JFL3 82 aa4.38□□□□□ -1.71
CLIP2-208ENST00000491075 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
CLIP2-208ENST00000491075 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
CLIP2-208ENST00000491075 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
CLIP2-208ENST00000491075 KRTAP21-2Q3LI59 83 aa4.08□□□□□ -1.76
CLIP2-208ENST00000491075 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CLIP2-208ENST00000491075 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
CLIP2-208ENST00000491075 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
CLIP2-208ENST00000491075 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
CLIP2-208ENST00000491075 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CLIP2-208ENST00000491075 H3BS24 57 aa3.69□□□□□ -1.82
CLIP2-208ENST00000491075 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
CLIP2-208ENST00000491075 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
CLIP2-208ENST00000491075 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
CLIP2-208ENST00000491075 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
CLIP2-208ENST00000491075 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CLIP2-208ENST00000491075 INE1O15225 51 aa2.7□□□□□ -1.98
CLIP2-208ENST00000491075 PRM1P04553 51 aa2.66□□□□□ -1.98
CLIP2-208ENST00000491075 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 31.3 ms