RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
SYNE4-205ENST00000490730 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
SYNE4-205ENST00000490730 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
SYNE4-205ENST00000490730 TNP1P09430 55 aa7.34□□□□□ -1.23
SYNE4-205ENST00000490730 KRTAP4-3Q9BYR4 195 aa7.33□□□□□ -1.24
SYNE4-205ENST00000490730 V9GYY9 64 aa7.28□□□□□ -1.24
SYNE4-205ENST00000490730 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
SYNE4-205ENST00000490730 Q1T7F1 81 aa7.24□□□□□ -1.25
SYNE4-205ENST00000490730 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
SYNE4-205ENST00000490730 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
SYNE4-205ENST00000490730 PRR15LQ9BU68 103 aa7.16□□□□□ -1.26
SYNE4-205ENST00000490730 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
SYNE4-205ENST00000490730 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
SYNE4-205ENST00000490730 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
SYNE4-205ENST00000490730 KRTAP5-10Q6L8G5 202 aa7.04□□□□□ -1.28
SYNE4-205ENST00000490730 PSPHP1O15172 72 aa7.02□□□□□ -1.29
SYNE4-205ENST00000490730 UQCR11O14957 56 aa6.91□□□□□ -1.3
SYNE4-205ENST00000490730 A6NED7 52 aa6.86□□□□□ -1.31
SYNE4-205ENST00000490730 KRTAP20-2Q3LI61 65 aa6.85□□□□□ -1.31
SYNE4-205ENST00000490730 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
SYNE4-205ENST00000490730 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
SYNE4-205ENST00000490730 MIR22HGQ0VDD5 57 aa6.79□□□□□ -1.32
SYNE4-205ENST00000490730 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
SYNE4-205ENST00000490730 KRTAP5-7Q6L8G8 165 aa6.79□□□□□ -1.32
SYNE4-205ENST00000490730 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
SYNE4-205ENST00000490730 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
SYNE4-205ENST00000490730 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
SYNE4-205ENST00000490730 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
SYNE4-205ENST00000490730 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
SYNE4-205ENST00000490730 K7ERS5 55 aa6.67□□□□□ -1.34
SYNE4-205ENST00000490730 SYNE1Q8NF91 8797 aaKnown RBP6.63□□□□□ -1.35
SYNE4-205ENST00000490730 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SYNE4-205ENST00000490730 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
SYNE4-205ENST00000490730 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
SYNE4-205ENST00000490730 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
SYNE4-205ENST00000490730 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
SYNE4-205ENST00000490730 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
SYNE4-205ENST00000490730 MT1AP04731 61 aa6.32□□□□□ -1.4
SYNE4-205ENST00000490730 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
SYNE4-205ENST00000490730 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
SYNE4-205ENST00000490730 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
SYNE4-205ENST00000490730 ROMO1P60602 79 aa6.23□□□□□ -1.41
SYNE4-205ENST00000490730 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
SYNE4-205ENST00000490730 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
SYNE4-205ENST00000490730 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
SYNE4-205ENST00000490730 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
SYNE4-205ENST00000490730 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
SYNE4-205ENST00000490730 AHNAKQ09666 5890 aaKnown RBP6.06□□□□□ -1.44
SYNE4-205ENST00000490730 MUC5BQ9HC84 5762 aaPredicted RBP6.01□□□□□ -1.45
SYNE4-205ENST00000490730 MUC5ACP98088 5654 aa6□□□□□ -1.45
SYNE4-205ENST00000490730 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
SYNE4-205ENST00000490730 PRAC1Q96KF2 57 aa5.87□□□□□ -1.47
SYNE4-205ENST00000490730 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
SYNE4-205ENST00000490730 MT3P25713 68 aa5.8□□□□□ -1.48
SYNE4-205ENST00000490730 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SYNE4-205ENST00000490730 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
SYNE4-205ENST00000490730 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
SYNE4-205ENST00000490730 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
SYNE4-205ENST00000490730 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
SYNE4-205ENST00000490730 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
SYNE4-205ENST00000490730 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
SYNE4-205ENST00000490730 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
SYNE4-205ENST00000490730 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SYNE4-205ENST00000490730 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
SYNE4-205ENST00000490730 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
SYNE4-205ENST00000490730 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
SYNE4-205ENST00000490730 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
SYNE4-205ENST00000490730 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
SYNE4-205ENST00000490730 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
SYNE4-205ENST00000490730 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
SYNE4-205ENST00000490730 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
SYNE4-205ENST00000490730 INE1O15225 51 aa3.95□□□□□ -1.78
SYNE4-205ENST00000490730 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
SYNE4-205ENST00000490730 H3BS24 57 aa3.87□□□□□ -1.79
SYNE4-205ENST00000490730 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
SYNE4-205ENST00000490730 PRM1P04553 51 aa3.2□□□□□ -1.9
SYNE4-205ENST00000490730 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
SYNE4-205ENST00000490730 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 32.6 ms