RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SPRR2DP22532 72 aa5.89□□□□□ -1.47
VPS26A-207ENST00000490696 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
VPS26A-207ENST00000490696 UQCR11O14957 56 aa5.75□□□□□ -1.49
VPS26A-207ENST00000490696 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
VPS26A-207ENST00000490696 MT1EP04732 61 aa5.72□□□□□ -1.49
VPS26A-207ENST00000490696 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
VPS26A-207ENST00000490696 TNP1P09430 55 aa5.66□□□□□ -1.5
VPS26A-207ENST00000490696 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
VPS26A-207ENST00000490696 V9GYY9 64 aa5.65□□□□□ -1.5
VPS26A-207ENST00000490696 Q1T7F1 81 aa5.64□□□□□ -1.51
VPS26A-207ENST00000490696 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
VPS26A-207ENST00000490696 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
VPS26A-207ENST00000490696 PSPHP1O15172 72 aa5.61□□□□□ -1.51
VPS26A-207ENST00000490696 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
VPS26A-207ENST00000490696 MT1GP13640 62 aa5.52□□□□□ -1.53
VPS26A-207ENST00000490696 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
VPS26A-207ENST00000490696 PCP4P48539 62 aa5.5□□□□□ -1.53
VPS26A-207ENST00000490696 MT1LQ93083 61 aa5.5□□□□□ -1.53
VPS26A-207ENST00000490696 K7ERS5 55 aa5.48□□□□□ -1.53
VPS26A-207ENST00000490696 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.48□□□□□ -1.53
VPS26A-207ENST00000490696 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
VPS26A-207ENST00000490696 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
VPS26A-207ENST00000490696 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
VPS26A-207ENST00000490696 MT1MQ8N339 61 aa5.44□□□□□ -1.54
VPS26A-207ENST00000490696 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
VPS26A-207ENST00000490696 A6NED7 52 aa5.41□□□□□ -1.54
VPS26A-207ENST00000490696 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
VPS26A-207ENST00000490696 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
VPS26A-207ENST00000490696 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
VPS26A-207ENST00000490696 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
VPS26A-207ENST00000490696 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
VPS26A-207ENST00000490696 KRTAP5-11Q6L8G4 156 aa5.22□□□□□ -1.57
VPS26A-207ENST00000490696 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
VPS26A-207ENST00000490696 MT4P47944 62 aa5.18□□□□□ -1.58
VPS26A-207ENST00000490696 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
VPS26A-207ENST00000490696 ROMO1P60602 79 aa5.15□□□□□ -1.59
VPS26A-207ENST00000490696 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
VPS26A-207ENST00000490696 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
VPS26A-207ENST00000490696 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
VPS26A-207ENST00000490696 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
VPS26A-207ENST00000490696 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
VPS26A-207ENST00000490696 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
VPS26A-207ENST00000490696 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
VPS26A-207ENST00000490696 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
VPS26A-207ENST00000490696 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
VPS26A-207ENST00000490696 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
VPS26A-207ENST00000490696 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
VPS26A-207ENST00000490696 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
VPS26A-207ENST00000490696 MT1AP04731 61 aa4.67□□□□□ -1.66
VPS26A-207ENST00000490696 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
VPS26A-207ENST00000490696 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
VPS26A-207ENST00000490696 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.68
VPS26A-207ENST00000490696 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
VPS26A-207ENST00000490696 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
VPS26A-207ENST00000490696 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
VPS26A-207ENST00000490696 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
VPS26A-207ENST00000490696 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
VPS26A-207ENST00000490696 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
VPS26A-207ENST00000490696 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
VPS26A-207ENST00000490696 MT3P25713 68 aa4.26□□□□□ -1.73
VPS26A-207ENST00000490696 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
VPS26A-207ENST00000490696 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
VPS26A-207ENST00000490696 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
VPS26A-207ENST00000490696 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
VPS26A-207ENST00000490696 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
VPS26A-207ENST00000490696 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
VPS26A-207ENST00000490696 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
VPS26A-207ENST00000490696 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
VPS26A-207ENST00000490696 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
VPS26A-207ENST00000490696 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
VPS26A-207ENST00000490696 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
VPS26A-207ENST00000490696 NDUFAF8A1L188 74 aa3□□□□□ -1.93
VPS26A-207ENST00000490696 PRM1P04553 51 aa2.65□□□□□ -1.99
VPS26A-207ENST00000490696 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
VPS26A-207ENST00000490696 A0A0A0MQY5 61 aa2.58□□□□□ -2
VPS26A-207ENST00000490696 INE1O15225 51 aa2.42□□□□□ -2.02
VPS26A-207ENST00000490696 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
VPS26A-207ENST00000490696 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 95.4 ms