RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 SPRR2EP22531 72 aa3.76□□□□□ -1.81
PUM1-210ENST00000490546 SPRR2BP35325 72 aa3.76□□□□□ -1.81
PUM1-210ENST00000490546 SPRR2AP35326 72 aa3.76□□□□□ -1.81
PUM1-210ENST00000490546 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
PUM1-210ENST00000490546 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
PUM1-210ENST00000490546 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
PUM1-210ENST00000490546 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
PUM1-210ENST00000490546 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
PUM1-210ENST00000490546 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
PUM1-210ENST00000490546 MT1LQ93083 61 aa3.69□□□□□ -1.82
PUM1-210ENST00000490546 MT1GP13640 62 aa3.67□□□□□ -1.82
PUM1-210ENST00000490546 SPRR2DP22532 72 aa3.64□□□□□ -1.83
PUM1-210ENST00000490546 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
PUM1-210ENST00000490546 NEBP20929 6669 aa3.61□□□□□ -1.83
PUM1-210ENST00000490546 MT1MQ8N339 61 aa3.59□□□□□ -1.83
PUM1-210ENST00000490546 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
PUM1-210ENST00000490546 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
PUM1-210ENST00000490546 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
PUM1-210ENST00000490546 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
PUM1-210ENST00000490546 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
PUM1-210ENST00000490546 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
PUM1-210ENST00000490546 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
PUM1-210ENST00000490546 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
PUM1-210ENST00000490546 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
PUM1-210ENST00000490546 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
PUM1-210ENST00000490546 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
PUM1-210ENST00000490546 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
PUM1-210ENST00000490546 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
PUM1-210ENST00000490546 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
PUM1-210ENST00000490546 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
PUM1-210ENST00000490546 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
PUM1-210ENST00000490546 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
PUM1-210ENST00000490546 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
PUM1-210ENST00000490546 MT1AP04731 61 aa3.15□□□□□ -1.91
PUM1-210ENST00000490546 MT4P47944 62 aa3.14□□□□□ -1.91
PUM1-210ENST00000490546 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
PUM1-210ENST00000490546 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
PUM1-210ENST00000490546 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
PUM1-210ENST00000490546 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
PUM1-210ENST00000490546 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
PUM1-210ENST00000490546 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
PUM1-210ENST00000490546 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
PUM1-210ENST00000490546 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
PUM1-210ENST00000490546 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
PUM1-210ENST00000490546 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PUM1-210ENST00000490546 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
PUM1-210ENST00000490546 MT3P25713 68 aa2.9□□□□□ -1.95
PUM1-210ENST00000490546 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
PUM1-210ENST00000490546 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
PUM1-210ENST00000490546 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PUM1-210ENST00000490546 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
PUM1-210ENST00000490546 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
PUM1-210ENST00000490546 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
PUM1-210ENST00000490546 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
PUM1-210ENST00000490546 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
PUM1-210ENST00000490546 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
PUM1-210ENST00000490546 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
PUM1-210ENST00000490546 LCE1EQ5T753 118 aa2.54□□□□□ -2
PUM1-210ENST00000490546 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
PUM1-210ENST00000490546 KRTAP5-8O75690 187 aa2.53□□□□□ -2
PUM1-210ENST00000490546 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
PUM1-210ENST00000490546 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PUM1-210ENST00000490546 INE1O15225 51 aa2.44□□□□□ -2.02
PUM1-210ENST00000490546 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
PUM1-210ENST00000490546 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
PUM1-210ENST00000490546 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
PUM1-210ENST00000490546 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
PUM1-210ENST00000490546 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
PUM1-210ENST00000490546 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
PUM1-210ENST00000490546 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PUM1-210ENST00000490546 PRM1P04553 51 aa2.12□□□□□ -2.07
PUM1-210ENST00000490546 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
PUM1-210ENST00000490546 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
PUM1-210ENST00000490546 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PUM1-210ENST00000490546 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PUM1-210ENST00000490546 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
PUM1-210ENST00000490546 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PUM1-210ENST00000490546 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 30.7 ms