RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
UPK3B-205ENST00000490360 TNP1P09430 55 aa6.51□□□□□ -1.37
UPK3B-205ENST00000490360 A0A1B0GU33 70 aa6.5□□□□□ -1.37
UPK3B-205ENST00000490360 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
UPK3B-205ENST00000490360 COX7CP15954 63 aa6.42□□□□□ -1.38
UPK3B-205ENST00000490360 COA5Q86WW8 74 aa6.41□□□□□ -1.38
UPK3B-205ENST00000490360 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
UPK3B-205ENST00000490360 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
UPK3B-205ENST00000490360 H7BZZ5 65 aa6.34□□□□□ -1.39
UPK3B-205ENST00000490360 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
UPK3B-205ENST00000490360 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
UPK3B-205ENST00000490360 AHNAKQ09666 5890 aaKnown RBP6.21□□□□□ -1.41
UPK3B-205ENST00000490360 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
UPK3B-205ENST00000490360 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
UPK3B-205ENST00000490360 A8MU10 97 aa6.18□□□□□ -1.42
UPK3B-205ENST00000490360 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
UPK3B-205ENST00000490360 MUC5ACP98088 5654 aa6.15□□□□□ -1.43
UPK3B-205ENST00000490360 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
UPK3B-205ENST00000490360 A0A1B0GU69 56 aa6.11□□□□□ -1.43
UPK3B-205ENST00000490360 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
UPK3B-205ENST00000490360 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
UPK3B-205ENST00000490360 MUC5BQ9HC84 5762 aaPredicted RBP6.07□□□□□ -1.44
UPK3B-205ENST00000490360 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
UPK3B-205ENST00000490360 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
UPK3B-205ENST00000490360 MT1AP04731 61 aa5.91□□□□□ -1.46
UPK3B-205ENST00000490360 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
UPK3B-205ENST00000490360 TMEM258P61165 79 aa5.85□□□□□ -1.47
UPK3B-205ENST00000490360 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
UPK3B-205ENST00000490360 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
UPK3B-205ENST00000490360 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
UPK3B-205ENST00000490360 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
UPK3B-205ENST00000490360 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
UPK3B-205ENST00000490360 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
UPK3B-205ENST00000490360 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
UPK3B-205ENST00000490360 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
UPK3B-205ENST00000490360 UQCR11O14957 56 aa5.66□□□□□ -1.5
UPK3B-205ENST00000490360 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
UPK3B-205ENST00000490360 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
UPK3B-205ENST00000490360 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
UPK3B-205ENST00000490360 PSPHP1O15172 72 aa5.55□□□□□ -1.52
UPK3B-205ENST00000490360 V9GYY9 64 aa5.52□□□□□ -1.53
UPK3B-205ENST00000490360 Q1T7F1 81 aa5.49□□□□□ -1.53
UPK3B-205ENST00000490360 MT3P25713 68 aa5.47□□□□□ -1.53
UPK3B-205ENST00000490360 K7ERS5 55 aa5.45□□□□□ -1.54
UPK3B-205ENST00000490360 PCP4P48539 62 aa5.45□□□□□ -1.54
UPK3B-205ENST00000490360 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
UPK3B-205ENST00000490360 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
UPK3B-205ENST00000490360 A6NED7 52 aa5.31□□□□□ -1.56
UPK3B-205ENST00000490360 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
UPK3B-205ENST00000490360 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
UPK3B-205ENST00000490360 ROMO1P60602 79 aa5.09□□□□□ -1.59
UPK3B-205ENST00000490360 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
UPK3B-205ENST00000490360 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
UPK3B-205ENST00000490360 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
UPK3B-205ENST00000490360 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
UPK3B-205ENST00000490360 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
UPK3B-205ENST00000490360 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
UPK3B-205ENST00000490360 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
UPK3B-205ENST00000490360 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
UPK3B-205ENST00000490360 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
UPK3B-205ENST00000490360 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
UPK3B-205ENST00000490360 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
UPK3B-205ENST00000490360 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
UPK3B-205ENST00000490360 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
UPK3B-205ENST00000490360 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
UPK3B-205ENST00000490360 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
UPK3B-205ENST00000490360 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
UPK3B-205ENST00000490360 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
UPK3B-205ENST00000490360 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
UPK3B-205ENST00000490360 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
UPK3B-205ENST00000490360 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
UPK3B-205ENST00000490360 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
UPK3B-205ENST00000490360 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
UPK3B-205ENST00000490360 PRM1P04553 51 aa2.64□□□□□ -1.99
UPK3B-205ENST00000490360 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
UPK3B-205ENST00000490360 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
UPK3B-205ENST00000490360 INE1O15225 51 aa2.47□□□□□ -2.01
UPK3B-205ENST00000490360 H3BS24 57 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 45.9 ms