RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
ECM1-205ENST00000490346 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
ECM1-205ENST00000490346 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
ECM1-205ENST00000490346 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
ECM1-205ENST00000490346 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
ECM1-205ENST00000490346 MT1GP13640 62 aa3.28□□□□□ -1.88
ECM1-205ENST00000490346 MT1LQ93083 61 aa3.28□□□□□ -1.88
ECM1-205ENST00000490346 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
ECM1-205ENST00000490346 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
ECM1-205ENST00000490346 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
ECM1-205ENST00000490346 MT1MQ8N339 61 aa3.24□□□□□ -1.89
ECM1-205ENST00000490346 ROMO1P60602 79 aa3.21□□□□□ -1.9
ECM1-205ENST00000490346 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
ECM1-205ENST00000490346 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
ECM1-205ENST00000490346 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
ECM1-205ENST00000490346 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
ECM1-205ENST00000490346 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
ECM1-205ENST00000490346 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
ECM1-205ENST00000490346 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
ECM1-205ENST00000490346 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
ECM1-205ENST00000490346 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
ECM1-205ENST00000490346 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
ECM1-205ENST00000490346 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
ECM1-205ENST00000490346 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
ECM1-205ENST00000490346 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
ECM1-205ENST00000490346 LCE1DQ5T752 114 aa3□□□□□ -1.93
ECM1-205ENST00000490346 MT4P47944 62 aa2.99□□□□□ -1.93
ECM1-205ENST00000490346 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
ECM1-205ENST00000490346 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
ECM1-205ENST00000490346 H3BS24 57 aa2.93□□□□□ -1.94
ECM1-205ENST00000490346 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
ECM1-205ENST00000490346 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
ECM1-205ENST00000490346 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
ECM1-205ENST00000490346 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
ECM1-205ENST00000490346 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
ECM1-205ENST00000490346 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
ECM1-205ENST00000490346 MT1AP04731 61 aa2.79□□□□□ -1.96
ECM1-205ENST00000490346 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
ECM1-205ENST00000490346 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
ECM1-205ENST00000490346 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
ECM1-205ENST00000490346 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
ECM1-205ENST00000490346 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
ECM1-205ENST00000490346 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
ECM1-205ENST00000490346 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
ECM1-205ENST00000490346 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
ECM1-205ENST00000490346 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
ECM1-205ENST00000490346 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
ECM1-205ENST00000490346 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
ECM1-205ENST00000490346 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
ECM1-205ENST00000490346 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
ECM1-205ENST00000490346 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
ECM1-205ENST00000490346 MT3P25713 68 aa2.54□□□□□ -2
ECM1-205ENST00000490346 SVIPQ8NHG7 77 aa2.54□□□□□ -2
ECM1-205ENST00000490346 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
ECM1-205ENST00000490346 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
ECM1-205ENST00000490346 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
ECM1-205ENST00000490346 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
ECM1-205ENST00000490346 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
ECM1-205ENST00000490346 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
ECM1-205ENST00000490346 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
ECM1-205ENST00000490346 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
ECM1-205ENST00000490346 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
ECM1-205ENST00000490346 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
ECM1-205ENST00000490346 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
ECM1-205ENST00000490346 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
ECM1-205ENST00000490346 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
ECM1-205ENST00000490346 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
ECM1-205ENST00000490346 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
ECM1-205ENST00000490346 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
ECM1-205ENST00000490346 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
ECM1-205ENST00000490346 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
ECM1-205ENST00000490346 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
ECM1-205ENST00000490346 PRM1P04553 51 aa1.66□□□□□ -2.14
ECM1-205ENST00000490346 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
ECM1-205ENST00000490346 INE1O15225 51 aa1.59□□□□□ -2.15
ECM1-205ENST00000490346 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.17
ECM1-205ENST00000490346 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
ECM1-205ENST00000490346 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 41.4 ms