RNA–Protein interactions for RNA: ENST00000490302.1

PKDCC-208, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 1,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-208ENST00000490302 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
PKDCC-208ENST00000490302 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
PKDCC-208ENST00000490302 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
PKDCC-208ENST00000490302 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
PKDCC-208ENST00000490302 KRTAP5-7Q6L8G8 165 aa6.06□□□□□ -1.44
PKDCC-208ENST00000490302 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
PKDCC-208ENST00000490302 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
PKDCC-208ENST00000490302 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
PKDCC-208ENST00000490302 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
PKDCC-208ENST00000490302 V9GYY9 64 aa6□□□□□ -1.45
PKDCC-208ENST00000490302 A8MU10 97 aa5.97□□□□□ -1.45
PKDCC-208ENST00000490302 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
PKDCC-208ENST00000490302 Q1T7F1 81 aa5.93□□□□□ -1.46
PKDCC-208ENST00000490302 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
PKDCC-208ENST00000490302 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
PKDCC-208ENST00000490302 UQCR11O14957 56 aa5.84□□□□□ -1.47
PKDCC-208ENST00000490302 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
PKDCC-208ENST00000490302 TNP1P09430 55 aa5.82□□□□□ -1.48
PKDCC-208ENST00000490302 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
PKDCC-208ENST00000490302 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
PKDCC-208ENST00000490302 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
PKDCC-208ENST00000490302 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
PKDCC-208ENST00000490302 PSPHP1O15172 72 aa5.71□□□□□ -1.5
PKDCC-208ENST00000490302 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
PKDCC-208ENST00000490302 PRO0628Q9UI54 55 aa5.65□□□□□ -1.51
PKDCC-208ENST00000490302 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
PKDCC-208ENST00000490302 A6NED7 52 aa5.61□□□□□ -1.51
PKDCC-208ENST00000490302 K7ERS5 55 aa5.6□□□□□ -1.51
PKDCC-208ENST00000490302 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
PKDCC-208ENST00000490302 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
PKDCC-208ENST00000490302 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
PKDCC-208ENST00000490302 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
PKDCC-208ENST00000490302 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
PKDCC-208ENST00000490302 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
PKDCC-208ENST00000490302 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
PKDCC-208ENST00000490302 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
PKDCC-208ENST00000490302 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
PKDCC-208ENST00000490302 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PKDCC-208ENST00000490302 KRTAP5-8O75690 187 aa5.28□□□□□ -1.56
PKDCC-208ENST00000490302 ROMO1P60602 79 aa5.23□□□□□ -1.57
PKDCC-208ENST00000490302 MT1AP04731 61 aa5.23□□□□□ -1.57
PKDCC-208ENST00000490302 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
PKDCC-208ENST00000490302 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
PKDCC-208ENST00000490302 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
PKDCC-208ENST00000490302 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
PKDCC-208ENST00000490302 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
PKDCC-208ENST00000490302 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
PKDCC-208ENST00000490302 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
PKDCC-208ENST00000490302 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
PKDCC-208ENST00000490302 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
PKDCC-208ENST00000490302 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
PKDCC-208ENST00000490302 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
PKDCC-208ENST00000490302 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
PKDCC-208ENST00000490302 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
PKDCC-208ENST00000490302 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
PKDCC-208ENST00000490302 MT3P25713 68 aa4.8□□□□□ -1.64
PKDCC-208ENST00000490302 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
PKDCC-208ENST00000490302 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
PKDCC-208ENST00000490302 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
PKDCC-208ENST00000490302 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
PKDCC-208ENST00000490302 LUZP6Q538Z0 58 aa4.15□□□□□ -1.74
PKDCC-208ENST00000490302 H3BS24 57 aa4.11□□□□□ -1.75
PKDCC-208ENST00000490302 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
PKDCC-208ENST00000490302 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
PKDCC-208ENST00000490302 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
PKDCC-208ENST00000490302 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
PKDCC-208ENST00000490302 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
PKDCC-208ENST00000490302 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
PKDCC-208ENST00000490302 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
PKDCC-208ENST00000490302 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
PKDCC-208ENST00000490302 INE1O15225 51 aa3.46□□□□□ -1.86
PKDCC-208ENST00000490302 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PKDCC-208ENST00000490302 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PKDCC-208ENST00000490302 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PKDCC-208ENST00000490302 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
PKDCC-208ENST00000490302 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
PKDCC-208ENST00000490302 PRM1P04553 51 aa2.68□□□□□ -1.98
PKDCC-208ENST00000490302 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 203 ms