RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
SREBF2-207ENST00000490262 A0A1B0GU69 56 aa4.13□□□□□ -1.75
SREBF2-207ENST00000490262 A8MU10 97 aa4.13□□□□□ -1.75
SREBF2-207ENST00000490262 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
SREBF2-207ENST00000490262 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
SREBF2-207ENST00000490262 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SREBF2-207ENST00000490262 TNP1P09430 55 aa4.1□□□□□ -1.75
SREBF2-207ENST00000490262 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
SREBF2-207ENST00000490262 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
SREBF2-207ENST00000490262 V9GYY9 64 aa4.05□□□□□ -1.76
SREBF2-207ENST00000490262 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SREBF2-207ENST00000490262 Q1T7F1 81 aa4.03□□□□□ -1.76
SREBF2-207ENST00000490262 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
SREBF2-207ENST00000490262 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
SREBF2-207ENST00000490262 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
SREBF2-207ENST00000490262 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
SREBF2-207ENST00000490262 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
SREBF2-207ENST00000490262 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
SREBF2-207ENST00000490262 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
SREBF2-207ENST00000490262 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
SREBF2-207ENST00000490262 UQCR11O14957 56 aa3.88□□□□□ -1.79
SREBF2-207ENST00000490262 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SREBF2-207ENST00000490262 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SREBF2-207ENST00000490262 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
SREBF2-207ENST00000490262 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SREBF2-207ENST00000490262 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
SREBF2-207ENST00000490262 PSPHP1O15172 72 aa3.81□□□□□ -1.8
SREBF2-207ENST00000490262 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
SREBF2-207ENST00000490262 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
SREBF2-207ENST00000490262 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
SREBF2-207ENST00000490262 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
SREBF2-207ENST00000490262 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
SREBF2-207ENST00000490262 K7ERS5 55 aa3.76□□□□□ -1.81
SREBF2-207ENST00000490262 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
SREBF2-207ENST00000490262 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
SREBF2-207ENST00000490262 A6NED7 52 aa3.72□□□□□ -1.81
SREBF2-207ENST00000490262 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
SREBF2-207ENST00000490262 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
SREBF2-207ENST00000490262 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
SREBF2-207ENST00000490262 MT1AP04731 61 aa3.57□□□□□ -1.84
SREBF2-207ENST00000490262 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SREBF2-207ENST00000490262 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
SREBF2-207ENST00000490262 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
SREBF2-207ENST00000490262 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
SREBF2-207ENST00000490262 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SREBF2-207ENST00000490262 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SREBF2-207ENST00000490262 ROMO1P60602 79 aa3.45□□□□□ -1.86
SREBF2-207ENST00000490262 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SREBF2-207ENST00000490262 H3BS24 57 aa3.43□□□□□ -1.86
SREBF2-207ENST00000490262 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
SREBF2-207ENST00000490262 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SREBF2-207ENST00000490262 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
SREBF2-207ENST00000490262 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
SREBF2-207ENST00000490262 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
SREBF2-207ENST00000490262 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SREBF2-207ENST00000490262 MT3P25713 68 aa3.27□□□□□ -1.89
SREBF2-207ENST00000490262 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SREBF2-207ENST00000490262 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
SREBF2-207ENST00000490262 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
SREBF2-207ENST00000490262 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
SREBF2-207ENST00000490262 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
SREBF2-207ENST00000490262 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SREBF2-207ENST00000490262 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SREBF2-207ENST00000490262 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SREBF2-207ENST00000490262 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SREBF2-207ENST00000490262 INE1O15225 51 aa2.6□□□□□ -1.99
SREBF2-207ENST00000490262 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SREBF2-207ENST00000490262 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SREBF2-207ENST00000490262 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SREBF2-207ENST00000490262 LCE1FQ5T754 118 aa2.53□□□□□ -2
SREBF2-207ENST00000490262 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SREBF2-207ENST00000490262 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SREBF2-207ENST00000490262 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SREBF2-207ENST00000490262 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SREBF2-207ENST00000490262 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SREBF2-207ENST00000490262 PRM1P04553 51 aa1.78□□□□□ -2.12
SREBF2-207ENST00000490262 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SREBF2-207ENST00000490262 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 70.3 ms