RNA–Protein interactions for RNA: ENST00000490251.1

COA1-219, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 2,135 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-219ENST00000490251 KMT2DO14686 5537 aa3.51□□□□□ -1.85
COA1-219ENST00000490251 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
COA1-219ENST00000490251 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
COA1-219ENST00000490251 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
COA1-219ENST00000490251 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
COA1-219ENST00000490251 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
COA1-219ENST00000490251 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
COA1-219ENST00000490251 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
COA1-219ENST00000490251 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
COA1-219ENST00000490251 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
COA1-219ENST00000490251 INE1O15225 51 aa3.33□□□□□ -1.88
COA1-219ENST00000490251 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
COA1-219ENST00000490251 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
COA1-219ENST00000490251 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
COA1-219ENST00000490251 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
COA1-219ENST00000490251 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
COA1-219ENST00000490251 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
COA1-219ENST00000490251 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
COA1-219ENST00000490251 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
COA1-219ENST00000490251 MT1EP04732 61 aa3.14□□□□□ -1.91
COA1-219ENST00000490251 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
COA1-219ENST00000490251 NEBP20929 6669 aa3.14□□□□□ -1.91
COA1-219ENST00000490251 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
COA1-219ENST00000490251 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
COA1-219ENST00000490251 MT1LQ93083 61 aa3.09□□□□□ -1.91
COA1-219ENST00000490251 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
COA1-219ENST00000490251 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
COA1-219ENST00000490251 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
COA1-219ENST00000490251 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
COA1-219ENST00000490251 MT1GP13640 62 aa3□□□□□ -1.93
COA1-219ENST00000490251 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
COA1-219ENST00000490251 SPRR2EP22531 72 aa2.98□□□□□ -1.93
COA1-219ENST00000490251 SPRR2BP35325 72 aa2.98□□□□□ -1.93
COA1-219ENST00000490251 SPRR2AP35326 72 aa2.98□□□□□ -1.93
COA1-219ENST00000490251 MT1MQ8N339 61 aa2.97□□□□□ -1.93
COA1-219ENST00000490251 MT3P25713 68 aa2.96□□□□□ -1.94
COA1-219ENST00000490251 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
COA1-219ENST00000490251 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
COA1-219ENST00000490251 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
COA1-219ENST00000490251 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
COA1-219ENST00000490251 SPRR2DP22532 72 aa2.87□□□□□ -1.95
COA1-219ENST00000490251 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
COA1-219ENST00000490251 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
COA1-219ENST00000490251 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
COA1-219ENST00000490251 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
COA1-219ENST00000490251 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
COA1-219ENST00000490251 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
COA1-219ENST00000490251 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
COA1-219ENST00000490251 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
COA1-219ENST00000490251 MT1AP04731 61 aa2.6□□□□□ -1.99
COA1-219ENST00000490251 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
COA1-219ENST00000490251 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
COA1-219ENST00000490251 MT4P47944 62 aa2.54□□□□□ -2
COA1-219ENST00000490251 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
COA1-219ENST00000490251 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
COA1-219ENST00000490251 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
COA1-219ENST00000490251 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
COA1-219ENST00000490251 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
COA1-219ENST00000490251 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
COA1-219ENST00000490251 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
COA1-219ENST00000490251 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
COA1-219ENST00000490251 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
COA1-219ENST00000490251 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
COA1-219ENST00000490251 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
COA1-219ENST00000490251 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
COA1-219ENST00000490251 PRM1P04553 51 aa2.25□□□□□ -2.05
COA1-219ENST00000490251 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
COA1-219ENST00000490251 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
COA1-219ENST00000490251 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
COA1-219ENST00000490251 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
COA1-219ENST00000490251 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
COA1-219ENST00000490251 MUC5ACP98088 5654 aa2□□□□□ -2.09
COA1-219ENST00000490251 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
COA1-219ENST00000490251 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
COA1-219ENST00000490251 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
COA1-219ENST00000490251 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
COA1-219ENST00000490251 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
COA1-219ENST00000490251 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms