RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
FDPS-215ENST00000490140 MT1EP04732 61 aa4.4□□□□□ -1.71
FDPS-215ENST00000490140 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
FDPS-215ENST00000490140 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
FDPS-215ENST00000490140 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
FDPS-215ENST00000490140 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
FDPS-215ENST00000490140 UQCR11O14957 56 aa4.35□□□□□ -1.71
FDPS-215ENST00000490140 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
FDPS-215ENST00000490140 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
FDPS-215ENST00000490140 MT1GP13640 62 aa4.32□□□□□ -1.72
FDPS-215ENST00000490140 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
FDPS-215ENST00000490140 A0A1B0GU33 70 aa4.31□□□□□ -1.72
FDPS-215ENST00000490140 K7ERS5 55 aa4.31□□□□□ -1.72
FDPS-215ENST00000490140 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
FDPS-215ENST00000490140 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
FDPS-215ENST00000490140 A0A0D9SG42 100 aa4.29□□□□□ -1.72
FDPS-215ENST00000490140 MT4P47944 62 aa4.26□□□□□ -1.73
FDPS-215ENST00000490140 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
FDPS-215ENST00000490140 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
FDPS-215ENST00000490140 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
FDPS-215ENST00000490140 MT1MQ8N339 61 aa4.2□□□□□ -1.74
FDPS-215ENST00000490140 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
FDPS-215ENST00000490140 MT1LQ93083 61 aa4.16□□□□□ -1.74
FDPS-215ENST00000490140 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
FDPS-215ENST00000490140 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
FDPS-215ENST00000490140 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
FDPS-215ENST00000490140 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
FDPS-215ENST00000490140 TNP1P09430 55 aa4.07□□□□□ -1.76
FDPS-215ENST00000490140 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
FDPS-215ENST00000490140 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
FDPS-215ENST00000490140 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
FDPS-215ENST00000490140 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
FDPS-215ENST00000490140 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
FDPS-215ENST00000490140 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
FDPS-215ENST00000490140 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
FDPS-215ENST00000490140 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
FDPS-215ENST00000490140 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
FDPS-215ENST00000490140 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
FDPS-215ENST00000490140 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
FDPS-215ENST00000490140 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
FDPS-215ENST00000490140 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
FDPS-215ENST00000490140 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
FDPS-215ENST00000490140 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
FDPS-215ENST00000490140 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
FDPS-215ENST00000490140 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
FDPS-215ENST00000490140 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
FDPS-215ENST00000490140 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
FDPS-215ENST00000490140 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
FDPS-215ENST00000490140 INE1O15225 51 aa3.56□□□□□ -1.84
FDPS-215ENST00000490140 MT1AP04731 61 aa3.56□□□□□ -1.84
FDPS-215ENST00000490140 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
FDPS-215ENST00000490140 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
FDPS-215ENST00000490140 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
FDPS-215ENST00000490140 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
FDPS-215ENST00000490140 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
FDPS-215ENST00000490140 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
FDPS-215ENST00000490140 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
FDPS-215ENST00000490140 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
FDPS-215ENST00000490140 MT3P25713 68 aa3.3□□□□□ -1.88
FDPS-215ENST00000490140 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
FDPS-215ENST00000490140 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
FDPS-215ENST00000490140 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
FDPS-215ENST00000490140 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
FDPS-215ENST00000490140 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
FDPS-215ENST00000490140 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
FDPS-215ENST00000490140 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
FDPS-215ENST00000490140 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
FDPS-215ENST00000490140 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
FDPS-215ENST00000490140 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
FDPS-215ENST00000490140 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
FDPS-215ENST00000490140 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
FDPS-215ENST00000490140 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
FDPS-215ENST00000490140 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
FDPS-215ENST00000490140 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
FDPS-215ENST00000490140 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
FDPS-215ENST00000490140 PRM1P04553 51 aa2.06□□□□□ -2.08
FDPS-215ENST00000490140 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
FDPS-215ENST00000490140 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 109.8 ms