RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
PRPF40A-210ENST00000489741 LOC101927531A0A1B0GV80 90 aa2.63□□□□□ -1.99
PRPF40A-210ENST00000489741 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
PRPF40A-210ENST00000489741 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
PRPF40A-210ENST00000489741 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
PRPF40A-210ENST00000489741 ADM2Q7Z4H4 148 aa2.61□□□□□ -1.99
PRPF40A-210ENST00000489741 A8MUN3 132 aa2.6□□□□□ -1.99
PRPF40A-210ENST00000489741 SNURFQ9Y675 71 aa2.59□□□□□ -1.99
PRPF40A-210ENST00000489741 PLAC4Q8WY50 150 aa2.58□□□□□ -2
PRPF40A-210ENST00000489741 SPRR2DP22532 72 aa2.57□□□□□ -2
PRPF40A-210ENST00000489741 P0C880 135 aa2.56□□□□□ -2
PRPF40A-210ENST00000489741 H0Y9P7 68 aa2.55□□□□□ -2
PRPF40A-210ENST00000489741 R4GN34 69 aa2.54□□□□□ -2
PRPF40A-210ENST00000489741 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
PRPF40A-210ENST00000489741 PSPHP1O15172 72 aa2.52□□□□□ -2.01
PRPF40A-210ENST00000489741 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
PRPF40A-210ENST00000489741 M0QZ58 72 aa2.51□□□□□ -2.01
PRPF40A-210ENST00000489741 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
PRPF40A-210ENST00000489741 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
PRPF40A-210ENST00000489741 MP68P56378 58 aa2.5□□□□□ -2.01
PRPF40A-210ENST00000489741 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
PRPF40A-210ENST00000489741 SPANXA2-OT1Q8N9U9 137 aa2.5□□□□□ -2.01
PRPF40A-210ENST00000489741 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
PRPF40A-210ENST00000489741 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
PRPF40A-210ENST00000489741 A6NED7 52 aa2.48□□□□□ -2.01
PRPF40A-210ENST00000489741 H3BPC8 53 aa2.48□□□□□ -2.01
PRPF40A-210ENST00000489741 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
PRPF40A-210ENST00000489741 PRR15LQ9BU68 103 aa2.47□□□□□ -2.01
PRPF40A-210ENST00000489741 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
PRPF40A-210ENST00000489741 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
PRPF40A-210ENST00000489741 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
PRPF40A-210ENST00000489741 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
PRPF40A-210ENST00000489741 COA5Q86WW8 74 aa2.39□□□□□ -2.03
PRPF40A-210ENST00000489741 MT1EP04732 61 aa2.37□□□□□ -2.03
PRPF40A-210ENST00000489741 ACYP2P14621 99 aa2.37□□□□□ -2.03
PRPF40A-210ENST00000489741 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
PRPF40A-210ENST00000489741 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
PRPF40A-210ENST00000489741 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
PRPF40A-210ENST00000489741 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
PRPF40A-210ENST00000489741 ROMO1P60602 79 aa2.32□□□□□ -2.04
PRPF40A-210ENST00000489741 MT1GP13640 62 aa2.31□□□□□ -2.04
PRPF40A-210ENST00000489741 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
PRPF40A-210ENST00000489741 UQCR11O14957 56 aa2.29□□□□□ -2.04
PRPF40A-210ENST00000489741 CAMK2N1Q7Z7J9 78 aa2.29□□□□□ -2.04
PRPF40A-210ENST00000489741 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
PRPF40A-210ENST00000489741 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
PRPF40A-210ENST00000489741 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
PRPF40A-210ENST00000489741 A0A0D9SG42 100 aa2.26□□□□□ -2.05
PRPF40A-210ENST00000489741 A0A1B0GU69 56 aa2.26□□□□□ -2.05
PRPF40A-210ENST00000489741 MT1MQ8N339 61 aa2.26□□□□□ -2.05
PRPF40A-210ENST00000489741 MT4P47944 62 aa2.25□□□□□ -2.05
PRPF40A-210ENST00000489741 MT1LQ93083 61 aa2.25□□□□□ -2.05
PRPF40A-210ENST00000489741 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PRPF40A-210ENST00000489741 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
PRPF40A-210ENST00000489741 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
PRPF40A-210ENST00000489741 K7ERS5 55 aa2.2□□□□□ -2.06
PRPF40A-210ENST00000489741 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
PRPF40A-210ENST00000489741 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
PRPF40A-210ENST00000489741 A0A1B0GU33 70 aa2.17□□□□□ -2.06
PRPF40A-210ENST00000489741 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
PRPF40A-210ENST00000489741 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
PRPF40A-210ENST00000489741 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PRPF40A-210ENST00000489741 TNP1P09430 55 aa2.1□□□□□ -2.07
PRPF40A-210ENST00000489741 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
PRPF40A-210ENST00000489741 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
PRPF40A-210ENST00000489741 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
PRPF40A-210ENST00000489741 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
PRPF40A-210ENST00000489741 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
PRPF40A-210ENST00000489741 MT1AP04731 61 aa1.9□□□□□ -2.11
PRPF40A-210ENST00000489741 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
PRPF40A-210ENST00000489741 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
PRPF40A-210ENST00000489741 INE1O15225 51 aa1.85□□□□□ -2.11
PRPF40A-210ENST00000489741 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
PRPF40A-210ENST00000489741 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
PRPF40A-210ENST00000489741 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
PRPF40A-210ENST00000489741 PRM1P04553 51 aa1.09□□□□□ -2.23
PRPF40A-210ENST00000489741 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
PRPF40A-210ENST00000489741 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms