RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
VPS26A-205ENST00000489656 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
VPS26A-205ENST00000489656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
VPS26A-205ENST00000489656 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
VPS26A-205ENST00000489656 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
VPS26A-205ENST00000489656 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
VPS26A-205ENST00000489656 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.54
VPS26A-205ENST00000489656 KMT2DO14686 5537 aa5.39□□□□□ -1.55
VPS26A-205ENST00000489656 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
VPS26A-205ENST00000489656 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
VPS26A-205ENST00000489656 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
VPS26A-205ENST00000489656 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
VPS26A-205ENST00000489656 MT3P25713 68 aa5.19□□□□□ -1.58
VPS26A-205ENST00000489656 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
VPS26A-205ENST00000489656 MT1EP04732 61 aa5.18□□□□□ -1.58
VPS26A-205ENST00000489656 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
VPS26A-205ENST00000489656 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
VPS26A-205ENST00000489656 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
VPS26A-205ENST00000489656 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
VPS26A-205ENST00000489656 MT1LQ93083 61 aa5.06□□□□□ -1.6
VPS26A-205ENST00000489656 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
VPS26A-205ENST00000489656 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
VPS26A-205ENST00000489656 MT1GP13640 62 aa4.96□□□□□ -1.62
VPS26A-205ENST00000489656 SPRR2EP22531 72 aa4.92□□□□□ -1.62
VPS26A-205ENST00000489656 SPRR2BP35325 72 aa4.92□□□□□ -1.62
VPS26A-205ENST00000489656 SPRR2AP35326 72 aa4.92□□□□□ -1.62
VPS26A-205ENST00000489656 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
VPS26A-205ENST00000489656 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
VPS26A-205ENST00000489656 MT1MQ8N339 61 aa4.89□□□□□ -1.63
VPS26A-205ENST00000489656 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
VPS26A-205ENST00000489656 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
VPS26A-205ENST00000489656 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
VPS26A-205ENST00000489656 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
VPS26A-205ENST00000489656 NEBP20929 6669 aa4.76□□□□□ -1.65
VPS26A-205ENST00000489656 SPRR2DP22532 72 aa4.75□□□□□ -1.65
VPS26A-205ENST00000489656 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
VPS26A-205ENST00000489656 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
VPS26A-205ENST00000489656 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
VPS26A-205ENST00000489656 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
VPS26A-205ENST00000489656 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
VPS26A-205ENST00000489656 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
VPS26A-205ENST00000489656 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
VPS26A-205ENST00000489656 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
VPS26A-205ENST00000489656 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
VPS26A-205ENST00000489656 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
VPS26A-205ENST00000489656 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
VPS26A-205ENST00000489656 MT1AP04731 61 aa4.31□□□□□ -1.72
VPS26A-205ENST00000489656 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
VPS26A-205ENST00000489656 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
VPS26A-205ENST00000489656 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
VPS26A-205ENST00000489656 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
VPS26A-205ENST00000489656 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
VPS26A-205ENST00000489656 MT4P47944 62 aa4.08□□□□□ -1.76
VPS26A-205ENST00000489656 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
VPS26A-205ENST00000489656 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
VPS26A-205ENST00000489656 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
VPS26A-205ENST00000489656 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
VPS26A-205ENST00000489656 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
VPS26A-205ENST00000489656 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
VPS26A-205ENST00000489656 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
VPS26A-205ENST00000489656 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
VPS26A-205ENST00000489656 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
VPS26A-205ENST00000489656 INE1O15225 51 aa3.61□□□□□ -1.83
VPS26A-205ENST00000489656 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
VPS26A-205ENST00000489656 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
VPS26A-205ENST00000489656 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
VPS26A-205ENST00000489656 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
VPS26A-205ENST00000489656 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
VPS26A-205ENST00000489656 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
VPS26A-205ENST00000489656 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
VPS26A-205ENST00000489656 PRM1P04553 51 aa3.02□□□□□ -1.93
VPS26A-205ENST00000489656 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
VPS26A-205ENST00000489656 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
VPS26A-205ENST00000489656 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
VPS26A-205ENST00000489656 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
VPS26A-205ENST00000489656 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
VPS26A-205ENST00000489656 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
VPS26A-205ENST00000489656 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 227.6 ms