RNA–Protein interactions for RNA: ENST00000489647.4

POLR1D-206, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-206ENST00000489647 KRTAP10-5P60370 271 aa4.46□□□□□ -1.69
POLR1D-206ENST00000489647 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
POLR1D-206ENST00000489647 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
POLR1D-206ENST00000489647 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
POLR1D-206ENST00000489647 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
POLR1D-206ENST00000489647 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
POLR1D-206ENST00000489647 TNP1P09430 55 aa4.36□□□□□ -1.71
POLR1D-206ENST00000489647 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
POLR1D-206ENST00000489647 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
POLR1D-206ENST00000489647 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
POLR1D-206ENST00000489647 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
POLR1D-206ENST00000489647 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
POLR1D-206ENST00000489647 KMT2DO14686 5537 aa4.22□□□□□ -1.73
POLR1D-206ENST00000489647 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
POLR1D-206ENST00000489647 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
POLR1D-206ENST00000489647 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
POLR1D-206ENST00000489647 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
POLR1D-206ENST00000489647 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
POLR1D-206ENST00000489647 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
POLR1D-206ENST00000489647 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
POLR1D-206ENST00000489647 LCE1FQ5T754 118 aa4□□□□□ -1.77
POLR1D-206ENST00000489647 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
POLR1D-206ENST00000489647 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
POLR1D-206ENST00000489647 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
POLR1D-206ENST00000489647 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
POLR1D-206ENST00000489647 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
POLR1D-206ENST00000489647 MT1EP04732 61 aa3.92□□□□□ -1.78
POLR1D-206ENST00000489647 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.78
POLR1D-206ENST00000489647 MT1LQ93083 61 aa3.83□□□□□ -1.8
POLR1D-206ENST00000489647 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
POLR1D-206ENST00000489647 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
POLR1D-206ENST00000489647 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
POLR1D-206ENST00000489647 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
POLR1D-206ENST00000489647 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
POLR1D-206ENST00000489647 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
POLR1D-206ENST00000489647 MT1GP13640 62 aa3.73□□□□□ -1.81
POLR1D-206ENST00000489647 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
POLR1D-206ENST00000489647 SPRR2EP22531 72 aa3.72□□□□□ -1.81
POLR1D-206ENST00000489647 SPRR2BP35325 72 aa3.72□□□□□ -1.81
POLR1D-206ENST00000489647 SPRR2AP35326 72 aa3.72□□□□□ -1.81
POLR1D-206ENST00000489647 MT1MQ8N339 61 aa3.7□□□□□ -1.82
POLR1D-206ENST00000489647 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
POLR1D-206ENST00000489647 NEBP20929 6669 aa3.62□□□□□ -1.83
POLR1D-206ENST00000489647 SPRR2DP22532 72 aa3.58□□□□□ -1.84
POLR1D-206ENST00000489647 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
POLR1D-206ENST00000489647 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
POLR1D-206ENST00000489647 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
POLR1D-206ENST00000489647 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
POLR1D-206ENST00000489647 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
POLR1D-206ENST00000489647 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
POLR1D-206ENST00000489647 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
POLR1D-206ENST00000489647 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
POLR1D-206ENST00000489647 MT1AP04731 61 aa3.25□□□□□ -1.89
POLR1D-206ENST00000489647 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
POLR1D-206ENST00000489647 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
POLR1D-206ENST00000489647 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
POLR1D-206ENST00000489647 MT4P47944 62 aa3.12□□□□□ -1.91
POLR1D-206ENST00000489647 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
POLR1D-206ENST00000489647 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
POLR1D-206ENST00000489647 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
POLR1D-206ENST00000489647 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
POLR1D-206ENST00000489647 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
POLR1D-206ENST00000489647 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
POLR1D-206ENST00000489647 INE1O15225 51 aa2.79□□□□□ -1.96
POLR1D-206ENST00000489647 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
POLR1D-206ENST00000489647 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
POLR1D-206ENST00000489647 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
POLR1D-206ENST00000489647 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
POLR1D-206ENST00000489647 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
POLR1D-206ENST00000489647 PRM1P04553 51 aa2.37□□□□□ -2.03
POLR1D-206ENST00000489647 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
POLR1D-206ENST00000489647 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
POLR1D-206ENST00000489647 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
POLR1D-206ENST00000489647 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
POLR1D-206ENST00000489647 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
POLR1D-206ENST00000489647 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
POLR1D-206ENST00000489647 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms