RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
VTI1A-207ENST00000489357 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
VTI1A-207ENST00000489357 TNP1P09430 55 aa3.63□□□□□ -1.83
VTI1A-207ENST00000489357 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
VTI1A-207ENST00000489357 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
VTI1A-207ENST00000489357 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
VTI1A-207ENST00000489357 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
VTI1A-207ENST00000489357 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
VTI1A-207ENST00000489357 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
VTI1A-207ENST00000489357 MT1BP07438 61 aa3.52□□□□□ -1.85
VTI1A-207ENST00000489357 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
VTI1A-207ENST00000489357 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
VTI1A-207ENST00000489357 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
VTI1A-207ENST00000489357 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
VTI1A-207ENST00000489357 MT1XP80297 61 aa3.42□□□□□ -1.86
VTI1A-207ENST00000489357 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
VTI1A-207ENST00000489357 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
VTI1A-207ENST00000489357 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
VTI1A-207ENST00000489357 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
VTI1A-207ENST00000489357 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
VTI1A-207ENST00000489357 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
VTI1A-207ENST00000489357 NEBP20929 6669 aa3.3□□□□□ -1.88
VTI1A-207ENST00000489357 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
VTI1A-207ENST00000489357 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
VTI1A-207ENST00000489357 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
VTI1A-207ENST00000489357 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
VTI1A-207ENST00000489357 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
VTI1A-207ENST00000489357 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
VTI1A-207ENST00000489357 KMT2DO14686 5537 aa3.16□□□□□ -1.9
VTI1A-207ENST00000489357 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
VTI1A-207ENST00000489357 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
VTI1A-207ENST00000489357 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
VTI1A-207ENST00000489357 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
VTI1A-207ENST00000489357 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
VTI1A-207ENST00000489357 SPRR2EP22531 72 aa3.06□□□□□ -1.92
VTI1A-207ENST00000489357 SPRR2BP35325 72 aa3.06□□□□□ -1.92
VTI1A-207ENST00000489357 SPRR2AP35326 72 aa3.06□□□□□ -1.92
VTI1A-207ENST00000489357 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
VTI1A-207ENST00000489357 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
VTI1A-207ENST00000489357 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
VTI1A-207ENST00000489357 MT1EP04732 61 aa2.99□□□□□ -1.93
VTI1A-207ENST00000489357 MT1LQ93083 61 aa2.96□□□□□ -1.94
VTI1A-207ENST00000489357 SPRR2DP22532 72 aa2.95□□□□□ -1.94
VTI1A-207ENST00000489357 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
VTI1A-207ENST00000489357 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
VTI1A-207ENST00000489357 MT1GP13640 62 aa2.88□□□□□ -1.95
VTI1A-207ENST00000489357 INE1O15225 51 aa2.87□□□□□ -1.95
VTI1A-207ENST00000489357 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
VTI1A-207ENST00000489357 MT1MQ8N339 61 aa2.8□□□□□ -1.96
VTI1A-207ENST00000489357 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
VTI1A-207ENST00000489357 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
VTI1A-207ENST00000489357 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
VTI1A-207ENST00000489357 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
VTI1A-207ENST00000489357 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
VTI1A-207ENST00000489357 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
VTI1A-207ENST00000489357 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
VTI1A-207ENST00000489357 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
VTI1A-207ENST00000489357 MT4P47944 62 aa2.59□□□□□ -1.99
VTI1A-207ENST00000489357 MT1AP04731 61 aa2.55□□□□□ -2
VTI1A-207ENST00000489357 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
VTI1A-207ENST00000489357 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
VTI1A-207ENST00000489357 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
VTI1A-207ENST00000489357 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
VTI1A-207ENST00000489357 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
VTI1A-207ENST00000489357 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
VTI1A-207ENST00000489357 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
VTI1A-207ENST00000489357 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
VTI1A-207ENST00000489357 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
VTI1A-207ENST00000489357 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
VTI1A-207ENST00000489357 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
VTI1A-207ENST00000489357 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
VTI1A-207ENST00000489357 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
VTI1A-207ENST00000489357 PRM1P04553 51 aa2.05□□□□□ -2.08
VTI1A-207ENST00000489357 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
VTI1A-207ENST00000489357 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
VTI1A-207ENST00000489357 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
VTI1A-207ENST00000489357 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
VTI1A-207ENST00000489357 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms