RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
SMTN-218ENST00000489337 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
SMTN-218ENST00000489337 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
SMTN-218ENST00000489337 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
SMTN-218ENST00000489337 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
SMTN-218ENST00000489337 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SMTN-218ENST00000489337 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SMTN-218ENST00000489337 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
SMTN-218ENST00000489337 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
SMTN-218ENST00000489337 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
SMTN-218ENST00000489337 LCE2DQ5TA82 110 aaPredicted RBP4.03□□□□□ -1.76
SMTN-218ENST00000489337 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SMTN-218ENST00000489337 MT1EP04732 61 aa3.97□□□□□ -1.77
SMTN-218ENST00000489337 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
SMTN-218ENST00000489337 MT1LQ93083 61 aa3.92□□□□□ -1.78
SMTN-218ENST00000489337 MT1GP13640 62 aa3.92□□□□□ -1.78
SMTN-218ENST00000489337 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
SMTN-218ENST00000489337 SPRR2EP22531 72 aa3.84□□□□□ -1.8
SMTN-218ENST00000489337 SPRR2BP35325 72 aa3.84□□□□□ -1.8
SMTN-218ENST00000489337 SPRR2AP35326 72 aa3.84□□□□□ -1.8
SMTN-218ENST00000489337 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
SMTN-218ENST00000489337 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
SMTN-218ENST00000489337 MT1MQ8N339 61 aa3.77□□□□□ -1.81
SMTN-218ENST00000489337 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
SMTN-218ENST00000489337 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SMTN-218ENST00000489337 SPRR2DP22532 72 aa3.65□□□□□ -1.82
SMTN-218ENST00000489337 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
SMTN-218ENST00000489337 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
SMTN-218ENST00000489337 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
SMTN-218ENST00000489337 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
SMTN-218ENST00000489337 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
SMTN-218ENST00000489337 NEBP20929 6669 aa3.49□□□□□ -1.85
SMTN-218ENST00000489337 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
SMTN-218ENST00000489337 MT4P47944 62 aa3.44□□□□□ -1.86
SMTN-218ENST00000489337 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
SMTN-218ENST00000489337 PRM1P04553 51 aa3.42□□□□□ -1.86
SMTN-218ENST00000489337 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.86
SMTN-218ENST00000489337 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SMTN-218ENST00000489337 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SMTN-218ENST00000489337 MT1AP04731 61 aa3.37□□□□□ -1.87
SMTN-218ENST00000489337 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
SMTN-218ENST00000489337 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
SMTN-218ENST00000489337 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
SMTN-218ENST00000489337 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SMTN-218ENST00000489337 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
SMTN-218ENST00000489337 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
SMTN-218ENST00000489337 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
SMTN-218ENST00000489337 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
SMTN-218ENST00000489337 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SMTN-218ENST00000489337 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
SMTN-218ENST00000489337 MT3P25713 68 aa3.06□□□□□ -1.92
SMTN-218ENST00000489337 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SMTN-218ENST00000489337 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SMTN-218ENST00000489337 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
SMTN-218ENST00000489337 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
SMTN-218ENST00000489337 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
SMTN-218ENST00000489337 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
SMTN-218ENST00000489337 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
SMTN-218ENST00000489337 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
SMTN-218ENST00000489337 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
SMTN-218ENST00000489337 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
SMTN-218ENST00000489337 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SMTN-218ENST00000489337 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
SMTN-218ENST00000489337 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
SMTN-218ENST00000489337 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
SMTN-218ENST00000489337 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SMTN-218ENST00000489337 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
SMTN-218ENST00000489337 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SMTN-218ENST00000489337 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
SMTN-218ENST00000489337 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SMTN-218ENST00000489337 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
SMTN-218ENST00000489337 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SMTN-218ENST00000489337 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
SMTN-218ENST00000489337 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SMTN-218ENST00000489337 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
SMTN-218ENST00000489337 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
SMTN-218ENST00000489337 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SMTN-218ENST00000489337 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 88.1 ms