RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 A8MU10 97 aa5.69□□□□□ -1.5
ERGIC3-217ENST00000488935 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
ERGIC3-217ENST00000488935 MT1MQ8N339 61 aa5.68□□□□□ -1.5
ERGIC3-217ENST00000488935 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
ERGIC3-217ENST00000488935 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
ERGIC3-217ENST00000488935 MT1LQ93083 61 aa5.64□□□□□ -1.51
ERGIC3-217ENST00000488935 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
ERGIC3-217ENST00000488935 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
ERGIC3-217ENST00000488935 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
ERGIC3-217ENST00000488935 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
ERGIC3-217ENST00000488935 A6NED7 52 aa5.57□□□□□ -1.52
ERGIC3-217ENST00000488935 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
ERGIC3-217ENST00000488935 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
ERGIC3-217ENST00000488935 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
ERGIC3-217ENST00000488935 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
ERGIC3-217ENST00000488935 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
ERGIC3-217ENST00000488935 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
ERGIC3-217ENST00000488935 K7ERS5 55 aa5.47□□□□□ -1.53
ERGIC3-217ENST00000488935 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
ERGIC3-217ENST00000488935 TNP1P09430 55 aa5.38□□□□□ -1.55
ERGIC3-217ENST00000488935 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
ERGIC3-217ENST00000488935 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
ERGIC3-217ENST00000488935 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
ERGIC3-217ENST00000488935 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
ERGIC3-217ENST00000488935 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
ERGIC3-217ENST00000488935 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
ERGIC3-217ENST00000488935 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
ERGIC3-217ENST00000488935 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
ERGIC3-217ENST00000488935 ROMO1P60602 79 aa5.16□□□□□ -1.58
ERGIC3-217ENST00000488935 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
ERGIC3-217ENST00000488935 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
ERGIC3-217ENST00000488935 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
ERGIC3-217ENST00000488935 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
ERGIC3-217ENST00000488935 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
ERGIC3-217ENST00000488935 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
ERGIC3-217ENST00000488935 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
ERGIC3-217ENST00000488935 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
ERGIC3-217ENST00000488935 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
ERGIC3-217ENST00000488935 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
ERGIC3-217ENST00000488935 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
ERGIC3-217ENST00000488935 MT1AP04731 61 aa4.76□□□□□ -1.65
ERGIC3-217ENST00000488935 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
ERGIC3-217ENST00000488935 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
ERGIC3-217ENST00000488935 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
ERGIC3-217ENST00000488935 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
ERGIC3-217ENST00000488935 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
ERGIC3-217ENST00000488935 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
ERGIC3-217ENST00000488935 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
ERGIC3-217ENST00000488935 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
ERGIC3-217ENST00000488935 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
ERGIC3-217ENST00000488935 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
ERGIC3-217ENST00000488935 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
ERGIC3-217ENST00000488935 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
ERGIC3-217ENST00000488935 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
ERGIC3-217ENST00000488935 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
ERGIC3-217ENST00000488935 MT3P25713 68 aa4.35□□□□□ -1.71
ERGIC3-217ENST00000488935 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
ERGIC3-217ENST00000488935 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
ERGIC3-217ENST00000488935 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
ERGIC3-217ENST00000488935 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
ERGIC3-217ENST00000488935 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
ERGIC3-217ENST00000488935 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
ERGIC3-217ENST00000488935 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
ERGIC3-217ENST00000488935 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
ERGIC3-217ENST00000488935 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
ERGIC3-217ENST00000488935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
ERGIC3-217ENST00000488935 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
ERGIC3-217ENST00000488935 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
ERGIC3-217ENST00000488935 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
ERGIC3-217ENST00000488935 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
ERGIC3-217ENST00000488935 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
ERGIC3-217ENST00000488935 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
ERGIC3-217ENST00000488935 INE1O15225 51 aa2.89□□□□□ -1.95
ERGIC3-217ENST00000488935 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
ERGIC3-217ENST00000488935 PRM1P04553 51 aa2.66□□□□□ -1.98
ERGIC3-217ENST00000488935 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
ERGIC3-217ENST00000488935 H3BS24 57 aa2.35□□□□□ -2.03
ERGIC3-217ENST00000488935 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 55.9 ms