RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MT1MQ8N339 61 aa4.24□□□□□ -1.73
CCHCR1-215ENST00000488920 MT1LQ93083 61 aa4.24□□□□□ -1.73
CCHCR1-215ENST00000488920 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
CCHCR1-215ENST00000488920 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
CCHCR1-215ENST00000488920 TNP1P09430 55 aa4.22□□□□□ -1.73
CCHCR1-215ENST00000488920 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
CCHCR1-215ENST00000488920 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
CCHCR1-215ENST00000488920 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
CCHCR1-215ENST00000488920 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
CCHCR1-215ENST00000488920 A6NED7 52 aa4.16□□□□□ -1.74
CCHCR1-215ENST00000488920 MT4P47944 62 aa4.16□□□□□ -1.74
CCHCR1-215ENST00000488920 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
CCHCR1-215ENST00000488920 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
CCHCR1-215ENST00000488920 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
CCHCR1-215ENST00000488920 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
CCHCR1-215ENST00000488920 H3BS24 57 aa4.13□□□□□ -1.75
CCHCR1-215ENST00000488920 UQCR11O14957 56 aa4.12□□□□□ -1.75
CCHCR1-215ENST00000488920 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
CCHCR1-215ENST00000488920 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
CCHCR1-215ENST00000488920 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
CCHCR1-215ENST00000488920 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
CCHCR1-215ENST00000488920 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CCHCR1-215ENST00000488920 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
CCHCR1-215ENST00000488920 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
CCHCR1-215ENST00000488920 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
CCHCR1-215ENST00000488920 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
CCHCR1-215ENST00000488920 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
CCHCR1-215ENST00000488920 K7ERS5 55 aa3.88□□□□□ -1.79
CCHCR1-215ENST00000488920 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
CCHCR1-215ENST00000488920 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
CCHCR1-215ENST00000488920 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
CCHCR1-215ENST00000488920 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
CCHCR1-215ENST00000488920 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
CCHCR1-215ENST00000488920 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
CCHCR1-215ENST00000488920 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
CCHCR1-215ENST00000488920 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
CCHCR1-215ENST00000488920 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
CCHCR1-215ENST00000488920 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
CCHCR1-215ENST00000488920 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
CCHCR1-215ENST00000488920 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
CCHCR1-215ENST00000488920 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
CCHCR1-215ENST00000488920 ROMO1P60602 79 aa3.73□□□□□ -1.81
CCHCR1-215ENST00000488920 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
CCHCR1-215ENST00000488920 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
CCHCR1-215ENST00000488920 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
CCHCR1-215ENST00000488920 MT1AP04731 61 aa3.6□□□□□ -1.83
CCHCR1-215ENST00000488920 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
CCHCR1-215ENST00000488920 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
CCHCR1-215ENST00000488920 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CCHCR1-215ENST00000488920 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CCHCR1-215ENST00000488920 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
CCHCR1-215ENST00000488920 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
CCHCR1-215ENST00000488920 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
CCHCR1-215ENST00000488920 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
CCHCR1-215ENST00000488920 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CCHCR1-215ENST00000488920 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CCHCR1-215ENST00000488920 MT3P25713 68 aa3.3□□□□□ -1.88
CCHCR1-215ENST00000488920 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CCHCR1-215ENST00000488920 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
CCHCR1-215ENST00000488920 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
CCHCR1-215ENST00000488920 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
CCHCR1-215ENST00000488920 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CCHCR1-215ENST00000488920 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CCHCR1-215ENST00000488920 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
CCHCR1-215ENST00000488920 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
CCHCR1-215ENST00000488920 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CCHCR1-215ENST00000488920 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CCHCR1-215ENST00000488920 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CCHCR1-215ENST00000488920 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
CCHCR1-215ENST00000488920 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CCHCR1-215ENST00000488920 INE1O15225 51 aa2.48□□□□□ -2.01
CCHCR1-215ENST00000488920 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
CCHCR1-215ENST00000488920 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CCHCR1-215ENST00000488920 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
CCHCR1-215ENST00000488920 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CCHCR1-215ENST00000488920 PRM1P04553 51 aa1.95□□□□□ -2.1
CCHCR1-215ENST00000488920 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CCHCR1-215ENST00000488920 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 554.6 ms