RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 KRTAP8-1Q8IUC2 63 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
SSR1-209ENST00000488834 CSMD3Q7Z407 3707 aa0.9□□□□□ -2.27
SSR1-209ENST00000488834 HSPG2P98160 4391 aa0.89□□□□□ -2.27
SSR1-209ENST00000488834 ANK2Q01484 3957 aa0.88□□□□□ -2.27
SSR1-209ENST00000488834 DNAH7Q8WXX0 4024 aa0.88□□□□□ -2.27
SSR1-209ENST00000488834 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
SSR1-209ENST00000488834 MUC3AQ02505 3323 aa0.87□□□□□ -2.27
SSR1-209ENST00000488834 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
SSR1-209ENST00000488834 CSMD2Q7Z408 3487 aa0.86□□□□□ -2.27
SSR1-209ENST00000488834 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
SSR1-209ENST00000488834 CUBNO60494 3623 aa0.86□□□□□ -2.27
SSR1-209ENST00000488834 VPS13CQ709C8 3753 aa0.85□□□□□ -2.27
SSR1-209ENST00000488834 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
SSR1-209ENST00000488834 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
SSR1-209ENST00000488834 FAT2Q9NYQ8 4349 aa0.84□□□□□ -2.27
SSR1-209ENST00000488834 APOBP04114 4563 aaKnown RBP0.84□□□□□ -2.27
SSR1-209ENST00000488834 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
SSR1-209ENST00000488834 LRP1Q07954 4544 aaKnown RBP0.84□□□□□ -2.28
SSR1-209ENST00000488834 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
SSR1-209ENST00000488834 M0R2T5 61 aa0.83□□□□□ -2.28
SSR1-209ENST00000488834 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
SSR1-209ENST00000488834 SVEP1Q4LDE5 3571 aa0.83□□□□□ -2.28
SSR1-209ENST00000488834 PKHD1L1Q86WI1 4243 aa0.82□□□□□ -2.28
SSR1-209ENST00000488834 HMCN2Q8NDA2 5059 aa0.82□□□□□ -2.28
SSR1-209ENST00000488834 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
SSR1-209ENST00000488834 RNF213Q63HN8 5207 aa0.82□□□□□ -2.28
SSR1-209ENST00000488834 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
SSR1-209ENST00000488834 DYNC1H1Q14204 4646 aaKnown RBP0.8□□□□□ -2.28
SSR1-209ENST00000488834 KMT2DO14686 5537 aa0.8□□□□□ -2.28
SSR1-209ENST00000488834 TNXBP22105 4242 aa0.8□□□□□ -2.28
SSR1-209ENST00000488834 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
SSR1-209ENST00000488834 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
SSR1-209ENST00000488834 STARD9Q9P2P6 4700 aa0.78□□□□□ -2.28
SSR1-209ENST00000488834 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
SSR1-209ENST00000488834 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
SSR1-209ENST00000488834 PKHD1P08F94 4074 aa0.76□□□□□ -2.29
SSR1-209ENST00000488834 SPRR2GQ9BYE4 73 aa0.76□□□□□ -2.29
SSR1-209ENST00000488834 LRP1BQ9NZR2 4599 aa0.75□□□□□ -2.29
SSR1-209ENST00000488834 LPAP08519 4548 aa0.75□□□□□ -2.29
SSR1-209ENST00000488834 KRTAP19-2Q3LHN2 52 aa0.74□□□□□ -2.29
SSR1-209ENST00000488834 PRM1P04553 51 aa0.73□□□□□ -2.29
SSR1-209ENST00000488834 MUC17Q685J3 4493 aa0.73□□□□□ -2.29
SSR1-209ENST00000488834 FAT1Q14517 4588 aa0.72□□□□□ -2.29
SSR1-209ENST00000488834 MT1AP04731 61 aa0.71□□□□□ -2.3
SSR1-209ENST00000488834 KRTAP19-8Q3LI54 63 aa0.7□□□□□ -2.3
SSR1-209ENST00000488834 MT1XP80297 61 aa0.69□□□□□ -2.3
SSR1-209ENST00000488834 MT1EP04732 61 aa0.68□□□□□ -2.3
SSR1-209ENST00000488834 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
SSR1-209ENST00000488834 USH2AO75445 5202 aa0.66□□□□□ -2.3
SSR1-209ENST00000488834 MT1HL1P0DM35 61 aa0.66□□□□□ -2.3
SSR1-209ENST00000488834 MT1LQ93083 61 aa0.66□□□□□ -2.3
SSR1-209ENST00000488834 MT1BP07438 61 aa0.64□□□□□ -2.31
SSR1-209ENST00000488834 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
SSR1-209ENST00000488834 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
SSR1-209ENST00000488834 KRTAP19-7Q3SYF9 63 aa0.62□□□□□ -2.31
SSR1-209ENST00000488834 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
SSR1-209ENST00000488834 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
SSR1-209ENST00000488834 LRP2P98164 4655 aa0.6□□□□□ -2.31
SSR1-209ENST00000488834 SPRR2BP35325 72 aa0.6□□□□□ -2.31
SSR1-209ENST00000488834 SPRR2AP35326 72 aa0.6□□□□□ -2.31
SSR1-209ENST00000488834 MT1HP80294 61 aa0.59□□□□□ -2.31
SSR1-209ENST00000488834 MT2AP02795 61 aa0.58□□□□□ -2.32
SSR1-209ENST00000488834 MT1FP04733 61 aa0.58□□□□□ -2.32
SSR1-209ENST00000488834 SPRR2DP22532 72 aa0.58□□□□□ -2.32
SSR1-209ENST00000488834 SPRR2EP22531 72 aa0.57□□□□□ -2.32
SSR1-209ENST00000488834 MT1GP13640 62 aa0.56□□□□□ -2.32
SSR1-209ENST00000488834 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
SSR1-209ENST00000488834 MT1MQ8N339 61 aa0.53□□□□□ -2.32
SSR1-209ENST00000488834 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
SSR1-209ENST00000488834 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
SSR1-209ENST00000488834 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
SSR1-209ENST00000488834 MT4P47944 62 aa0.27□□□□□ -2.37
SSR1-209ENST00000488834 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 73.7 ms