RNA–Protein interactions for RNA: ENST00000488743.6

SLC5A6-217, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 3,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-217ENST00000488743 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
SLC5A6-217ENST00000488743 MDN1Q9NU22 5596 aa4.15□□□□□ -1.75
SLC5A6-217ENST00000488743 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
SLC5A6-217ENST00000488743 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
SLC5A6-217ENST00000488743 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
SLC5A6-217ENST00000488743 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
SLC5A6-217ENST00000488743 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
SLC5A6-217ENST00000488743 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
SLC5A6-217ENST00000488743 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
SLC5A6-217ENST00000488743 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
SLC5A6-217ENST00000488743 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SLC5A6-217ENST00000488743 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
SLC5A6-217ENST00000488743 MT1LQ93083 61 aa3.81□□□□□ -1.8
SLC5A6-217ENST00000488743 MT1EP04732 61 aa3.8□□□□□ -1.8
SLC5A6-217ENST00000488743 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
SLC5A6-217ENST00000488743 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
SLC5A6-217ENST00000488743 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
SLC5A6-217ENST00000488743 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SLC5A6-217ENST00000488743 NEBP20929 6669 aa3.73□□□□□ -1.81
SLC5A6-217ENST00000488743 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SLC5A6-217ENST00000488743 PRM1P04553 51 aa3.71□□□□□ -1.82
SLC5A6-217ENST00000488743 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
SLC5A6-217ENST00000488743 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SLC5A6-217ENST00000488743 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SLC5A6-217ENST00000488743 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SLC5A6-217ENST00000488743 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SLC5A6-217ENST00000488743 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SLC5A6-217ENST00000488743 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
SLC5A6-217ENST00000488743 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SLC5A6-217ENST00000488743 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
SLC5A6-217ENST00000488743 MT1GP13640 62 aa3.59□□□□□ -1.83
SLC5A6-217ENST00000488743 MT1MQ8N339 61 aa3.55□□□□□ -1.84
SLC5A6-217ENST00000488743 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
SLC5A6-217ENST00000488743 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SLC5A6-217ENST00000488743 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
SLC5A6-217ENST00000488743 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
SLC5A6-217ENST00000488743 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
SLC5A6-217ENST00000488743 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
SLC5A6-217ENST00000488743 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SLC5A6-217ENST00000488743 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SLC5A6-217ENST00000488743 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
SLC5A6-217ENST00000488743 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SLC5A6-217ENST00000488743 MT1AP04731 61 aa3.3□□□□□ -1.88
SLC5A6-217ENST00000488743 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
SLC5A6-217ENST00000488743 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
SLC5A6-217ENST00000488743 MT4P47944 62 aa3.23□□□□□ -1.89
SLC5A6-217ENST00000488743 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SLC5A6-217ENST00000488743 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
SLC5A6-217ENST00000488743 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
SLC5A6-217ENST00000488743 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
SLC5A6-217ENST00000488743 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
SLC5A6-217ENST00000488743 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
SLC5A6-217ENST00000488743 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
SLC5A6-217ENST00000488743 MT3P25713 68 aa2.89□□□□□ -1.95
SLC5A6-217ENST00000488743 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
SLC5A6-217ENST00000488743 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
SLC5A6-217ENST00000488743 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
SLC5A6-217ENST00000488743 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
SLC5A6-217ENST00000488743 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SLC5A6-217ENST00000488743 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
SLC5A6-217ENST00000488743 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
SLC5A6-217ENST00000488743 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
SLC5A6-217ENST00000488743 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
SLC5A6-217ENST00000488743 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SLC5A6-217ENST00000488743 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
SLC5A6-217ENST00000488743 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
SLC5A6-217ENST00000488743 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
SLC5A6-217ENST00000488743 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
SLC5A6-217ENST00000488743 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
SLC5A6-217ENST00000488743 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SLC5A6-217ENST00000488743 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SLC5A6-217ENST00000488743 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SLC5A6-217ENST00000488743 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
SLC5A6-217ENST00000488743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SLC5A6-217ENST00000488743 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SLC5A6-217ENST00000488743 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
SLC5A6-217ENST00000488743 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SLC5A6-217ENST00000488743 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms