RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
CXCL12-207ENST00000488591 PCP4P48539 62 aa5.71□□□□□ -1.5
CXCL12-207ENST00000488591 PSPHP1O15172 72 aa5.7□□□□□ -1.5
CXCL12-207ENST00000488591 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CXCL12-207ENST00000488591 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CXCL12-207ENST00000488591 TNP1P09430 55 aa5.68□□□□□ -1.5
CXCL12-207ENST00000488591 SPRR2DP22532 72 aa5.67□□□□□ -1.5
CXCL12-207ENST00000488591 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
CXCL12-207ENST00000488591 K7ERS5 55 aa5.63□□□□□ -1.51
CXCL12-207ENST00000488591 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CXCL12-207ENST00000488591 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
CXCL12-207ENST00000488591 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
CXCL12-207ENST00000488591 MT1EP04732 61 aa5.58□□□□□ -1.52
CXCL12-207ENST00000488591 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
CXCL12-207ENST00000488591 A6NED7 52 aa5.54□□□□□ -1.52
CXCL12-207ENST00000488591 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
CXCL12-207ENST00000488591 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
CXCL12-207ENST00000488591 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
CXCL12-207ENST00000488591 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
CXCL12-207ENST00000488591 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
CXCL12-207ENST00000488591 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
CXCL12-207ENST00000488591 MT1GP13640 62 aa5.43□□□□□ -1.54
CXCL12-207ENST00000488591 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
CXCL12-207ENST00000488591 MT1LQ93083 61 aa5.36□□□□□ -1.55
CXCL12-207ENST00000488591 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CXCL12-207ENST00000488591 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
CXCL12-207ENST00000488591 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
CXCL12-207ENST00000488591 MT1MQ8N339 61 aa5.3□□□□□ -1.56
CXCL12-207ENST00000488591 ROMO1P60602 79 aa5.22□□□□□ -1.57
CXCL12-207ENST00000488591 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
CXCL12-207ENST00000488591 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.04□□□□□ -1.6
CXCL12-207ENST00000488591 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
CXCL12-207ENST00000488591 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
CXCL12-207ENST00000488591 MT4P47944 62 aa4.93□□□□□ -1.62
CXCL12-207ENST00000488591 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
CXCL12-207ENST00000488591 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
CXCL12-207ENST00000488591 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
CXCL12-207ENST00000488591 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
CXCL12-207ENST00000488591 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
CXCL12-207ENST00000488591 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
CXCL12-207ENST00000488591 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
CXCL12-207ENST00000488591 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
CXCL12-207ENST00000488591 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
CXCL12-207ENST00000488591 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CXCL12-207ENST00000488591 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CXCL12-207ENST00000488591 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
CXCL12-207ENST00000488591 MT1AP04731 61 aa4.58□□□□□ -1.68
CXCL12-207ENST00000488591 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
CXCL12-207ENST00000488591 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CXCL12-207ENST00000488591 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CXCL12-207ENST00000488591 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
CXCL12-207ENST00000488591 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
CXCL12-207ENST00000488591 MT3P25713 68 aa4.36□□□□□ -1.71
CXCL12-207ENST00000488591 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
CXCL12-207ENST00000488591 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
CXCL12-207ENST00000488591 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
CXCL12-207ENST00000488591 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
CXCL12-207ENST00000488591 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
CXCL12-207ENST00000488591 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CXCL12-207ENST00000488591 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
CXCL12-207ENST00000488591 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
CXCL12-207ENST00000488591 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
CXCL12-207ENST00000488591 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CXCL12-207ENST00000488591 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CXCL12-207ENST00000488591 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
CXCL12-207ENST00000488591 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CXCL12-207ENST00000488591 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
CXCL12-207ENST00000488591 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CXCL12-207ENST00000488591 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
CXCL12-207ENST00000488591 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
CXCL12-207ENST00000488591 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
CXCL12-207ENST00000488591 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
CXCL12-207ENST00000488591 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
CXCL12-207ENST00000488591 PRM1P04553 51 aa2.66□□□□□ -1.98
CXCL12-207ENST00000488591 INE1O15225 51 aa2.59□□□□□ -1.99
CXCL12-207ENST00000488591 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
CXCL12-207ENST00000488591 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CXCL12-207ENST00000488591 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms