RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
SIK3-212ENST00000488337 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
SIK3-212ENST00000488337 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
SIK3-212ENST00000488337 KRTAP10-5P60370 271 aa2.41□□□□□ -2.02
SIK3-212ENST00000488337 KRTAP12-3P60328 96 aa2.4□□□□□ -2.02
SIK3-212ENST00000488337 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
SIK3-212ENST00000488337 FAT4Q6V0I7 4981 aa2.38□□□□□ -2.03
SIK3-212ENST00000488337 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
SIK3-212ENST00000488337 MT2AP02795 61 aa2.34□□□□□ -2.04
SIK3-212ENST00000488337 MT1FP04733 61 aa2.33□□□□□ -2.04
SIK3-212ENST00000488337 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
SIK3-212ENST00000488337 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
SIK3-212ENST00000488337 KRTAP19-8Q3LI54 63 aa2.28□□□□□ -2.04
SIK3-212ENST00000488337 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
SIK3-212ENST00000488337 MT1XP80297 61 aa2.27□□□□□ -2.05
SIK3-212ENST00000488337 MT1BP07438 61 aa2.25□□□□□ -2.05
SIK3-212ENST00000488337 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
SIK3-212ENST00000488337 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
SIK3-212ENST00000488337 SPRR2FQ96RM1 72 aa2.23□□□□□ -2.05
SIK3-212ENST00000488337 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SIK3-212ENST00000488337 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
SIK3-212ENST00000488337 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SIK3-212ENST00000488337 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SIK3-212ENST00000488337 MT3P25713 68 aa2.15□□□□□ -2.07
SIK3-212ENST00000488337 SPRR2EP22531 72 aa2.14□□□□□ -2.07
SIK3-212ENST00000488337 SPRR2BP35325 72 aa2.14□□□□□ -2.07
SIK3-212ENST00000488337 SPRR2AP35326 72 aa2.14□□□□□ -2.07
SIK3-212ENST00000488337 USH2AO75445 5202 aa2.12□□□□□ -2.07
SIK3-212ENST00000488337 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
SIK3-212ENST00000488337 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
SIK3-212ENST00000488337 SPRR2DP22532 72 aa2.07□□□□□ -2.08
SIK3-212ENST00000488337 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
SIK3-212ENST00000488337 KMT2DO14686 5537 aa2.07□□□□□ -2.08
SIK3-212ENST00000488337 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
SIK3-212ENST00000488337 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
SIK3-212ENST00000488337 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
SIK3-212ENST00000488337 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
SIK3-212ENST00000488337 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
SIK3-212ENST00000488337 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
SIK3-212ENST00000488337 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
SIK3-212ENST00000488337 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
SIK3-212ENST00000488337 MT1LQ93083 61 aa1.98□□□□□ -2.09
SIK3-212ENST00000488337 MT1EP04732 61 aa1.96□□□□□ -2.09
SIK3-212ENST00000488337 NEBP20929 6669 aa1.95□□□□□ -2.1
SIK3-212ENST00000488337 MT1GP13640 62 aa1.94□□□□□ -2.1
SIK3-212ENST00000488337 PRM1P04553 51 aa1.94□□□□□ -2.1
SIK3-212ENST00000488337 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
SIK3-212ENST00000488337 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
SIK3-212ENST00000488337 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
SIK3-212ENST00000488337 MT1AP04731 61 aa1.88□□□□□ -2.11
SIK3-212ENST00000488337 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SIK3-212ENST00000488337 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
SIK3-212ENST00000488337 KRTAP19-3Q7Z4W3 81 aa1.87□□□□□ -2.11
SIK3-212ENST00000488337 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
SIK3-212ENST00000488337 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
SIK3-212ENST00000488337 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
SIK3-212ENST00000488337 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SIK3-212ENST00000488337 MT1MQ8N339 61 aa1.84□□□□□ -2.12
SIK3-212ENST00000488337 MT4P47944 62 aa1.83□□□□□ -2.12
SIK3-212ENST00000488337 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SIK3-212ENST00000488337 MUC12Q9UKN1 5478 aa1.82□□□□□ -2.12
SIK3-212ENST00000488337 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
SIK3-212ENST00000488337 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
SIK3-212ENST00000488337 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
SIK3-212ENST00000488337 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
SIK3-212ENST00000488337 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
SIK3-212ENST00000488337 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
SIK3-212ENST00000488337 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
SIK3-212ENST00000488337 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
SIK3-212ENST00000488337 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SIK3-212ENST00000488337 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
SIK3-212ENST00000488337 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
SIK3-212ENST00000488337 MUC5ACP98088 5654 aa1.4□□□□□ -2.18
SIK3-212ENST00000488337 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
SIK3-212ENST00000488337 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
SIK3-212ENST00000488337 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
SIK3-212ENST00000488337 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
SIK3-212ENST00000488337 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 280.9 ms