RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 H7BZZ5 65 aa3.97□□□□□ -1.77
PCYT1A-215ENST00000488235 MT4P47944 62 aa3.97□□□□□ -1.77
PCYT1A-215ENST00000488235 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
PCYT1A-215ENST00000488235 A8MU10 97 aa3.96□□□□□ -1.78
PCYT1A-215ENST00000488235 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
PCYT1A-215ENST00000488235 COX7CP15954 63 aa3.95□□□□□ -1.78
PCYT1A-215ENST00000488235 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
PCYT1A-215ENST00000488235 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
PCYT1A-215ENST00000488235 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
PCYT1A-215ENST00000488235 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
PCYT1A-215ENST00000488235 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
PCYT1A-215ENST00000488235 A0A1B0GU69 56 aa3.88□□□□□ -1.79
PCYT1A-215ENST00000488235 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
PCYT1A-215ENST00000488235 TNP1P09430 55 aa3.83□□□□□ -1.8
PCYT1A-215ENST00000488235 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
PCYT1A-215ENST00000488235 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
PCYT1A-215ENST00000488235 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
PCYT1A-215ENST00000488235 ANAPC13Q9BS18 74 aa3.72□□□□□ -1.81
PCYT1A-215ENST00000488235 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
PCYT1A-215ENST00000488235 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
PCYT1A-215ENST00000488235 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
PCYT1A-215ENST00000488235 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
PCYT1A-215ENST00000488235 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
PCYT1A-215ENST00000488235 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
PCYT1A-215ENST00000488235 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
PCYT1A-215ENST00000488235 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
PCYT1A-215ENST00000488235 UQCR11O14957 56 aa3.57□□□□□ -1.84
PCYT1A-215ENST00000488235 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
PCYT1A-215ENST00000488235 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
PCYT1A-215ENST00000488235 MIR22HGQ0VDD5 57 aa3.5□□□□□ -1.85
PCYT1A-215ENST00000488235 TMEM258P61165 79 aa3.49□□□□□ -1.85
PCYT1A-215ENST00000488235 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
PCYT1A-215ENST00000488235 SVIPQ8NHG7 77 aa3.42□□□□□ -1.86
PCYT1A-215ENST00000488235 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
PCYT1A-215ENST00000488235 PSPHP1O15172 72 aa3.4□□□□□ -1.87
PCYT1A-215ENST00000488235 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
PCYT1A-215ENST00000488235 K7ERS5 55 aa3.38□□□□□ -1.87
PCYT1A-215ENST00000488235 MT1AP04731 61 aa3.37□□□□□ -1.87
PCYT1A-215ENST00000488235 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
PCYT1A-215ENST00000488235 Q1T7F1 81 aa3.32□□□□□ -1.88
PCYT1A-215ENST00000488235 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PCYT1A-215ENST00000488235 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
PCYT1A-215ENST00000488235 V9GYY9 64 aa3.28□□□□□ -1.88
PCYT1A-215ENST00000488235 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
PCYT1A-215ENST00000488235 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
PCYT1A-215ENST00000488235 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
PCYT1A-215ENST00000488235 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
PCYT1A-215ENST00000488235 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
PCYT1A-215ENST00000488235 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
PCYT1A-215ENST00000488235 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
PCYT1A-215ENST00000488235 A6NED7 52 aa3.23□□□□□ -1.89
PCYT1A-215ENST00000488235 ROMO1P60602 79 aa3.2□□□□□ -1.9
PCYT1A-215ENST00000488235 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
PCYT1A-215ENST00000488235 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
PCYT1A-215ENST00000488235 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
PCYT1A-215ENST00000488235 MT3P25713 68 aa3.06□□□□□ -1.92
PCYT1A-215ENST00000488235 PCP4P48539 62 aa2.99□□□□□ -1.93
PCYT1A-215ENST00000488235 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
PCYT1A-215ENST00000488235 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
PCYT1A-215ENST00000488235 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
PCYT1A-215ENST00000488235 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
PCYT1A-215ENST00000488235 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
PCYT1A-215ENST00000488235 BRK1Q8WUW1 75 aa2.61□□□□□ -1.99
PCYT1A-215ENST00000488235 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
PCYT1A-215ENST00000488235 PRAC1Q96KF2 57 aa2.47□□□□□ -2.01
PCYT1A-215ENST00000488235 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
PCYT1A-215ENST00000488235 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
PCYT1A-215ENST00000488235 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
PCYT1A-215ENST00000488235 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PCYT1A-215ENST00000488235 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
PCYT1A-215ENST00000488235 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
PCYT1A-215ENST00000488235 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
PCYT1A-215ENST00000488235 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
PCYT1A-215ENST00000488235 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
PCYT1A-215ENST00000488235 PRM1P04553 51 aa1.67□□□□□ -2.14
PCYT1A-215ENST00000488235 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
PCYT1A-215ENST00000488235 INE1O15225 51 aa1.55□□□□□ -2.16
PCYT1A-215ENST00000488235 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms