RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
ITSN1-230ENST00000488166 SMIM26A0A096LP01 95 aa6.19□□□□□ -1.42
ITSN1-230ENST00000488166 MT1GP13640 62 aa6.17□□□□□ -1.42
ITSN1-230ENST00000488166 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
ITSN1-230ENST00000488166 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
ITSN1-230ENST00000488166 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
ITSN1-230ENST00000488166 A8MU10 97 aa6.15□□□□□ -1.42
ITSN1-230ENST00000488166 V9GYY9 64 aa6.15□□□□□ -1.42
ITSN1-230ENST00000488166 MT4P47944 62 aa6.14□□□□□ -1.43
ITSN1-230ENST00000488166 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
ITSN1-230ENST00000488166 Q1T7F1 81 aa6.11□□□□□ -1.43
ITSN1-230ENST00000488166 UQCR11O14957 56 aa6.1□□□□□ -1.43
ITSN1-230ENST00000488166 PSPHP1O15172 72 aa6.08□□□□□ -1.44
ITSN1-230ENST00000488166 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
ITSN1-230ENST00000488166 MT1MQ8N339 61 aa6.06□□□□□ -1.44
ITSN1-230ENST00000488166 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
ITSN1-230ENST00000488166 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
ITSN1-230ENST00000488166 MT1LQ93083 61 aa6.01□□□□□ -1.45
ITSN1-230ENST00000488166 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
ITSN1-230ENST00000488166 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
ITSN1-230ENST00000488166 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
ITSN1-230ENST00000488166 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
ITSN1-230ENST00000488166 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
ITSN1-230ENST00000488166 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
ITSN1-230ENST00000488166 A6NED7 52 aa5.9□□□□□ -1.46
ITSN1-230ENST00000488166 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
ITSN1-230ENST00000488166 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
ITSN1-230ENST00000488166 TNP1P09430 55 aa5.85□□□□□ -1.47
ITSN1-230ENST00000488166 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
ITSN1-230ENST00000488166 K7ERS5 55 aa5.83□□□□□ -1.48
ITSN1-230ENST00000488166 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
ITSN1-230ENST00000488166 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
ITSN1-230ENST00000488166 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
ITSN1-230ENST00000488166 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
ITSN1-230ENST00000488166 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
ITSN1-230ENST00000488166 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
ITSN1-230ENST00000488166 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
ITSN1-230ENST00000488166 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
ITSN1-230ENST00000488166 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
ITSN1-230ENST00000488166 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
ITSN1-230ENST00000488166 ROMO1P60602 79 aa5.5□□□□□ -1.53
ITSN1-230ENST00000488166 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
ITSN1-230ENST00000488166 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
ITSN1-230ENST00000488166 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
ITSN1-230ENST00000488166 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
ITSN1-230ENST00000488166 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
ITSN1-230ENST00000488166 MT1AP04731 61 aa5.11□□□□□ -1.59
ITSN1-230ENST00000488166 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
ITSN1-230ENST00000488166 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
ITSN1-230ENST00000488166 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
ITSN1-230ENST00000488166 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
ITSN1-230ENST00000488166 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
ITSN1-230ENST00000488166 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
ITSN1-230ENST00000488166 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
ITSN1-230ENST00000488166 AHNAKQ09666 5890 aaKnown RBP4.91□□□□□ -1.62
ITSN1-230ENST00000488166 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
ITSN1-230ENST00000488166 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
ITSN1-230ENST00000488166 MT3P25713 68 aa4.78□□□□□ -1.64
ITSN1-230ENST00000488166 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
ITSN1-230ENST00000488166 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
ITSN1-230ENST00000488166 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
ITSN1-230ENST00000488166 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
ITSN1-230ENST00000488166 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
ITSN1-230ENST00000488166 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
ITSN1-230ENST00000488166 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
ITSN1-230ENST00000488166 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
ITSN1-230ENST00000488166 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
ITSN1-230ENST00000488166 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
ITSN1-230ENST00000488166 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
ITSN1-230ENST00000488166 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
ITSN1-230ENST00000488166 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
ITSN1-230ENST00000488166 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
ITSN1-230ENST00000488166 INE1O15225 51 aa3.18□□□□□ -1.9
ITSN1-230ENST00000488166 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
ITSN1-230ENST00000488166 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
ITSN1-230ENST00000488166 PRM1P04553 51 aa2.84□□□□□ -1.95
ITSN1-230ENST00000488166 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
ITSN1-230ENST00000488166 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 40.7 ms