RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 NEBP20929 6669 aa5.14□□□□□ -1.59
NUP188-207ENST00000487952 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
NUP188-207ENST00000487952 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
NUP188-207ENST00000487952 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
NUP188-207ENST00000487952 SPRR2DP22532 72 aa5.02□□□□□ -1.61
NUP188-207ENST00000487952 MT1LQ93083 61 aa5.02□□□□□ -1.61
NUP188-207ENST00000487952 MT1GP13640 62 aa5□□□□□ -1.61
NUP188-207ENST00000487952 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
NUP188-207ENST00000487952 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
NUP188-207ENST00000487952 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
NUP188-207ENST00000487952 MT1MQ8N339 61 aa4.91□□□□□ -1.62
NUP188-207ENST00000487952 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
NUP188-207ENST00000487952 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
NUP188-207ENST00000487952 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
NUP188-207ENST00000487952 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
NUP188-207ENST00000487952 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
NUP188-207ENST00000487952 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
NUP188-207ENST00000487952 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
NUP188-207ENST00000487952 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
NUP188-207ENST00000487952 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
NUP188-207ENST00000487952 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
NUP188-207ENST00000487952 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
NUP188-207ENST00000487952 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
NUP188-207ENST00000487952 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
NUP188-207ENST00000487952 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
NUP188-207ENST00000487952 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
NUP188-207ENST00000487952 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
NUP188-207ENST00000487952 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
NUP188-207ENST00000487952 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
NUP188-207ENST00000487952 MT4P47944 62 aa4.36□□□□□ -1.71
NUP188-207ENST00000487952 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
NUP188-207ENST00000487952 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
NUP188-207ENST00000487952 MT1AP04731 61 aa4.29□□□□□ -1.72
NUP188-207ENST00000487952 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
NUP188-207ENST00000487952 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
NUP188-207ENST00000487952 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
NUP188-207ENST00000487952 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
NUP188-207ENST00000487952 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
NUP188-207ENST00000487952 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
NUP188-207ENST00000487952 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
NUP188-207ENST00000487952 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
NUP188-207ENST00000487952 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
NUP188-207ENST00000487952 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
NUP188-207ENST00000487952 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
NUP188-207ENST00000487952 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
NUP188-207ENST00000487952 MT3P25713 68 aa3.92□□□□□ -1.78
NUP188-207ENST00000487952 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
NUP188-207ENST00000487952 H3BS24 57 aa3.8□□□□□ -1.8
NUP188-207ENST00000487952 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
NUP188-207ENST00000487952 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
NUP188-207ENST00000487952 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
NUP188-207ENST00000487952 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
NUP188-207ENST00000487952 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
NUP188-207ENST00000487952 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
NUP188-207ENST00000487952 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
NUP188-207ENST00000487952 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
NUP188-207ENST00000487952 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
NUP188-207ENST00000487952 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
NUP188-207ENST00000487952 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
NUP188-207ENST00000487952 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
NUP188-207ENST00000487952 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
NUP188-207ENST00000487952 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
NUP188-207ENST00000487952 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
NUP188-207ENST00000487952 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
NUP188-207ENST00000487952 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
NUP188-207ENST00000487952 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
NUP188-207ENST00000487952 INE1O15225 51 aa3.06□□□□□ -1.92
NUP188-207ENST00000487952 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
NUP188-207ENST00000487952 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
NUP188-207ENST00000487952 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
NUP188-207ENST00000487952 PRM1P04553 51 aa2.78□□□□□ -1.96
NUP188-207ENST00000487952 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
NUP188-207ENST00000487952 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
NUP188-207ENST00000487952 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NUP188-207ENST00000487952 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
NUP188-207ENST00000487952 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
NUP188-207ENST00000487952 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
NUP188-207ENST00000487952 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms