RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 MT1LQ93083 61 aa4.69□□□□□ -1.66
NR1H3-224ENST00000487913 A0A1B0GU69 56 aa4.65□□□□□ -1.67
NR1H3-224ENST00000487913 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
NR1H3-224ENST00000487913 A0A1B0GU33 70 aa4.62□□□□□ -1.67
NR1H3-224ENST00000487913 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
NR1H3-224ENST00000487913 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
NR1H3-224ENST00000487913 A0A0D9SG42 100 aa4.6□□□□□ -1.67
NR1H3-224ENST00000487913 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
NR1H3-224ENST00000487913 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
NR1H3-224ENST00000487913 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
NR1H3-224ENST00000487913 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
NR1H3-224ENST00000487913 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
NR1H3-224ENST00000487913 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
NR1H3-224ENST00000487913 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
NR1H3-224ENST00000487913 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
NR1H3-224ENST00000487913 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
NR1H3-224ENST00000487913 V9GYY9 64 aa4.49□□□□□ -1.69
NR1H3-224ENST00000487913 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
NR1H3-224ENST00000487913 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
NR1H3-224ENST00000487913 Q1T7F1 81 aa4.46□□□□□ -1.7
NR1H3-224ENST00000487913 UQCR11O14957 56 aa4.44□□□□□ -1.7
NR1H3-224ENST00000487913 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
NR1H3-224ENST00000487913 A8MU10 97 aa4.43□□□□□ -1.7
NR1H3-224ENST00000487913 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
NR1H3-224ENST00000487913 PSPHP1O15172 72 aa4.39□□□□□ -1.71
NR1H3-224ENST00000487913 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
NR1H3-224ENST00000487913 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
NR1H3-224ENST00000487913 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
NR1H3-224ENST00000487913 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
NR1H3-224ENST00000487913 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
NR1H3-224ENST00000487913 A6NED7 52 aa4.27□□□□□ -1.73
NR1H3-224ENST00000487913 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
NR1H3-224ENST00000487913 K7ERS5 55 aa4.23□□□□□ -1.73
NR1H3-224ENST00000487913 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
NR1H3-224ENST00000487913 TNP1P09430 55 aa4.18□□□□□ -1.74
NR1H3-224ENST00000487913 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
NR1H3-224ENST00000487913 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
NR1H3-224ENST00000487913 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
NR1H3-224ENST00000487913 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
NR1H3-224ENST00000487913 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
NR1H3-224ENST00000487913 ROMO1P60602 79 aa3.99□□□□□ -1.77
NR1H3-224ENST00000487913 MT1AP04731 61 aa3.96□□□□□ -1.78
NR1H3-224ENST00000487913 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
NR1H3-224ENST00000487913 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
NR1H3-224ENST00000487913 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
NR1H3-224ENST00000487913 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
NR1H3-224ENST00000487913 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
NR1H3-224ENST00000487913 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
NR1H3-224ENST00000487913 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
NR1H3-224ENST00000487913 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
NR1H3-224ENST00000487913 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
NR1H3-224ENST00000487913 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
NR1H3-224ENST00000487913 H3BS24 57 aa3.7□□□□□ -1.82
NR1H3-224ENST00000487913 MT3P25713 68 aa3.64□□□□□ -1.83
NR1H3-224ENST00000487913 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
NR1H3-224ENST00000487913 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
NR1H3-224ENST00000487913 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
NR1H3-224ENST00000487913 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
NR1H3-224ENST00000487913 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
NR1H3-224ENST00000487913 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
NR1H3-224ENST00000487913 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
NR1H3-224ENST00000487913 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
NR1H3-224ENST00000487913 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
NR1H3-224ENST00000487913 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
NR1H3-224ENST00000487913 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
NR1H3-224ENST00000487913 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
NR1H3-224ENST00000487913 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
NR1H3-224ENST00000487913 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
NR1H3-224ENST00000487913 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
NR1H3-224ENST00000487913 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
NR1H3-224ENST00000487913 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
NR1H3-224ENST00000487913 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
NR1H3-224ENST00000487913 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
NR1H3-224ENST00000487913 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
NR1H3-224ENST00000487913 INE1O15225 51 aa2.45□□□□□ -2.02
NR1H3-224ENST00000487913 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
NR1H3-224ENST00000487913 PRM1P04553 51 aa2.04□□□□□ -2.08
NR1H3-224ENST00000487913 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms