RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 MT1EP04732 61 aa4.81□□□□□ -1.64
RPSA-208ENST00000487876 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
RPSA-208ENST00000487876 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
RPSA-208ENST00000487876 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
RPSA-208ENST00000487876 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
RPSA-208ENST00000487876 TMEM258P61165 79 aa4.73□□□□□ -1.65
RPSA-208ENST00000487876 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
RPSA-208ENST00000487876 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
RPSA-208ENST00000487876 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
RPSA-208ENST00000487876 TNP1P09430 55 aa4.64□□□□□ -1.67
RPSA-208ENST00000487876 MT1GP13640 62 aa4.61□□□□□ -1.67
RPSA-208ENST00000487876 MT1LQ93083 61 aa4.61□□□□□ -1.67
RPSA-208ENST00000487876 UQCR11O14957 56 aa4.6□□□□□ -1.67
RPSA-208ENST00000487876 MT1MQ8N339 61 aa4.58□□□□□ -1.68
RPSA-208ENST00000487876 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
RPSA-208ENST00000487876 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
RPSA-208ENST00000487876 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
RPSA-208ENST00000487876 PSPHP1O15172 72 aa4.48□□□□□ -1.69
RPSA-208ENST00000487876 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
RPSA-208ENST00000487876 Q1T7F1 81 aa4.43□□□□□ -1.7
RPSA-208ENST00000487876 V9GYY9 64 aa4.42□□□□□ -1.7
RPSA-208ENST00000487876 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
RPSA-208ENST00000487876 K7ERS5 55 aa4.38□□□□□ -1.71
RPSA-208ENST00000487876 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
RPSA-208ENST00000487876 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
RPSA-208ENST00000487876 MT4P47944 62 aa4.37□□□□□ -1.71
RPSA-208ENST00000487876 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
RPSA-208ENST00000487876 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
RPSA-208ENST00000487876 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
RPSA-208ENST00000487876 A6NED7 52 aa4.31□□□□□ -1.72
RPSA-208ENST00000487876 MT3P25713 68 aa4.31□□□□□ -1.72
RPSA-208ENST00000487876 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
RPSA-208ENST00000487876 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
RPSA-208ENST00000487876 PCP4P48539 62 aa4.2□□□□□ -1.74
RPSA-208ENST00000487876 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
RPSA-208ENST00000487876 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
RPSA-208ENST00000487876 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
RPSA-208ENST00000487876 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
RPSA-208ENST00000487876 ROMO1P60602 79 aa4.13□□□□□ -1.75
RPSA-208ENST00000487876 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
RPSA-208ENST00000487876 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
RPSA-208ENST00000487876 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
RPSA-208ENST00000487876 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
RPSA-208ENST00000487876 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
RPSA-208ENST00000487876 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
RPSA-208ENST00000487876 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
RPSA-208ENST00000487876 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
RPSA-208ENST00000487876 MT1AP04731 61 aa3.9□□□□□ -1.79
RPSA-208ENST00000487876 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
RPSA-208ENST00000487876 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
RPSA-208ENST00000487876 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
RPSA-208ENST00000487876 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
RPSA-208ENST00000487876 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
RPSA-208ENST00000487876 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
RPSA-208ENST00000487876 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
RPSA-208ENST00000487876 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
RPSA-208ENST00000487876 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
RPSA-208ENST00000487876 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
RPSA-208ENST00000487876 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
RPSA-208ENST00000487876 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
RPSA-208ENST00000487876 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
RPSA-208ENST00000487876 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
RPSA-208ENST00000487876 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
RPSA-208ENST00000487876 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
RPSA-208ENST00000487876 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
RPSA-208ENST00000487876 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
RPSA-208ENST00000487876 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
RPSA-208ENST00000487876 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
RPSA-208ENST00000487876 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
RPSA-208ENST00000487876 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
RPSA-208ENST00000487876 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
RPSA-208ENST00000487876 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
RPSA-208ENST00000487876 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
RPSA-208ENST00000487876 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
RPSA-208ENST00000487876 PRM1P04553 51 aa2.14□□□□□ -2.07
RPSA-208ENST00000487876 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
RPSA-208ENST00000487876 INE1O15225 51 aa1.76□□□□□ -2.13
RPSA-208ENST00000487876 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms