RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 NREPQ16612 68 aa1.33□□□□□ -2.2
CNN3-206ENST00000487539 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
CNN3-206ENST00000487539 J3KT08 172 aa1.32□□□□□ -2.2
CNN3-206ENST00000487539 hDV103S1A0JD37 113 aa1.31□□□□□ -2.2
CNN3-206ENST00000487539 F8W1H4 67 aa1.31□□□□□ -2.2
CNN3-206ENST00000487539 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
CNN3-206ENST00000487539 PSPHP1O15172 72 aa1.3□□□□□ -2.2
CNN3-206ENST00000487539 UBL5Q9BZL1 73 aa1.3□□□□□ -2.2
CNN3-206ENST00000487539 CASC2Q6XLA1 102 aa1.29□□□□□ -2.2
CNN3-206ENST00000487539 A0A0D9SG42 100 aa1.28□□□□□ -2.2
CNN3-206ENST00000487539 HIST1H4AP62805 103 aaKnown RBP1.28□□□□□ -2.2
CNN3-206ENST00000487539 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
CNN3-206ENST00000487539 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
CNN3-206ENST00000487539 FAM240AA0A1B0GVK7 77 aa1.26□□□□□ -2.21
CNN3-206ENST00000487539 A0A1B0GW54 56 aa1.26□□□□□ -2.21
CNN3-206ENST00000487539 MT-ATP8P03928 68 aa1.26□□□□□ -2.21
CNN3-206ENST00000487539 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
CNN3-206ENST00000487539 NDUFC1O43677 76 aa1.25□□□□□ -2.21
CNN3-206ENST00000487539 LINC00643Q86TS7 51 aa1.25□□□□□ -2.21
CNN3-206ENST00000487539 ACYP1P07311 99 aa1.24□□□□□ -2.21
CNN3-206ENST00000487539 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
CNN3-206ENST00000487539 H0Y9P7 68 aa1.23□□□□□ -2.21
CNN3-206ENST00000487539 KRTAP25-1Q3LHN0 102 aa1.23□□□□□ -2.21
CNN3-206ENST00000487539 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
CNN3-206ENST00000487539 TRAV22A0A0B4J277 110 aa1.22□□□□□ -2.21
CNN3-206ENST00000487539 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
CNN3-206ENST00000487539 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
CNN3-206ENST00000487539 J3QR89 54 aa1.21□□□□□ -2.22
CNN3-206ENST00000487539 K7ERU9 68 aa1.21□□□□□ -2.22
CNN3-206ENST00000487539 UQCRQO14949 82 aa1.21□□□□□ -2.22
CNN3-206ENST00000487539 SCGB1A1P11684 91 aa1.21□□□□□ -2.22
CNN3-206ENST00000487539 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
CNN3-206ENST00000487539 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
CNN3-206ENST00000487539 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
CNN3-206ENST00000487539 MT1AP04731 61 aa1.19□□□□□ -2.22
CNN3-206ENST00000487539 MP68P56378 58 aa1.18□□□□□ -2.22
CNN3-206ENST00000487539 TRAV7A0A075B6U4 112 aa1.17□□□□□ -2.22
CNN3-206ENST00000487539 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CNN3-206ENST00000487539 ATOX1O00244 68 aa1.17□□□□□ -2.22
CNN3-206ENST00000487539 C20orf197Q8N268 126 aa1.17□□□□□ -2.22
CNN3-206ENST00000487539 SERP2Q8N6R1 65 aa1.15□□□□□ -2.23
CNN3-206ENST00000487539 DMAC1Q96GE9 116 aa1.15□□□□□ -2.23
CNN3-206ENST00000487539 CCDC179H3BU77 68 aa1.14□□□□□ -2.23
CNN3-206ENST00000487539 K7ERS5 55 aa1.14□□□□□ -2.23
CNN3-206ENST00000487539 A0A1B0GU33 70 aa1.13□□□□□ -2.23
CNN3-206ENST00000487539 H3BPC8 53 aa1.13□□□□□ -2.23
CNN3-206ENST00000487539 COX7CP15954 63 aa1.13□□□□□ -2.23
CNN3-206ENST00000487539 ANAPC13Q9BS18 74 aa1.13□□□□□ -2.23
CNN3-206ENST00000487539 CHKB-CPT1BH3BT56 60 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 H7BZZ5 65 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 ACYP2P14621 99 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 COA5Q86WW8 74 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 SMIM20Q8N5G0 67 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 PRO0628Q9UI54 55 aa1.12□□□□□ -2.23
CNN3-206ENST00000487539 SPATA8Q6RVD6 105 aa1.08□□□□□ -2.24
CNN3-206ENST00000487539 SPTSSBQ8NFR3 76 aa1.06□□□□□ -2.24
CNN3-206ENST00000487539 A0A1B0GU69 56 aa1.04□□□□□ -2.24
CNN3-206ENST00000487539 A6NED7 52 aa1.03□□□□□ -2.24
CNN3-206ENST00000487539 TMEM258P61165 79 aa1.03□□□□□ -2.24
CNN3-206ENST00000487539 SERP1Q9Y6X1 66 aa1.03□□□□□ -2.24
CNN3-206ENST00000487539 PRR15LQ9BU68 103 aa1.02□□□□□ -2.25
CNN3-206ENST00000487539 ATP5EP56381 51 aaPredicted RBP1.01□□□□□ -2.25
CNN3-206ENST00000487539 LINC01558Q9Y6Z2 57 aa1.01□□□□□ -2.25
CNN3-206ENST00000487539 MIR22HGQ0VDD5 57 aa0.97□□□□□ -2.25
CNN3-206ENST00000487539 UQCR11O14957 56 aa0.96□□□□□ -2.26
CNN3-206ENST00000487539 Q1T7F1 81 aa0.96□□□□□ -2.26
CNN3-206ENST00000487539 TNP1P09430 55 aa0.94□□□□□ -2.26
CNN3-206ENST00000487539 V9GYY9 64 aa0.93□□□□□ -2.26
CNN3-206ENST00000487539 RPS28P62857 69 aaKnown RBP0.92□□□□□ -2.26
CNN3-206ENST00000487539 CDC42SE1Q9NRR8 79 aa0.9□□□□□ -2.27
CNN3-206ENST00000487539 ROMO1P60602 79 aa0.88□□□□□ -2.27
CNN3-206ENST00000487539 BRK1Q8WUW1 75 aa0.88□□□□□ -2.27
CNN3-206ENST00000487539 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CNN3-206ENST00000487539 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CNN3-206ENST00000487539 PMAIP1Q13794 54 aa0.81□□□□□ -2.28
CNN3-206ENST00000487539 KTN1-AS1Q86SY8 53 aa0.73□□□□□ -2.29
CNN3-206ENST00000487539 PRM1P04553 51 aa0.49□□□□□ -2.33
CNN3-206ENST00000487539 INE1O15225 51 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 127.3 ms