RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
SPEN-205ENST00000487496 K7ERS5 55 aa4.33□□□□□ -1.72
SPEN-205ENST00000487496 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
SPEN-205ENST00000487496 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SPEN-205ENST00000487496 A0A1B0GU69 56 aa4.3□□□□□ -1.72
SPEN-205ENST00000487496 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SPEN-205ENST00000487496 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
SPEN-205ENST00000487496 MT1EP04732 61 aa4.27□□□□□ -1.73
SPEN-205ENST00000487496 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
SPEN-205ENST00000487496 A8MU10 97 aa4.23□□□□□ -1.73
SPEN-205ENST00000487496 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
SPEN-205ENST00000487496 A6NED7 52 aa4.2□□□□□ -1.74
SPEN-205ENST00000487496 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
SPEN-205ENST00000487496 ATP5EP56381 51 aaPredicted RBP4.19□□□□□ -1.74
SPEN-205ENST00000487496 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
SPEN-205ENST00000487496 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
SPEN-205ENST00000487496 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
SPEN-205ENST00000487496 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
SPEN-205ENST00000487496 MT1GP13640 62 aa4.13□□□□□ -1.75
SPEN-205ENST00000487496 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
SPEN-205ENST00000487496 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
SPEN-205ENST00000487496 TNP1P09430 55 aa4.11□□□□□ -1.75
SPEN-205ENST00000487496 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
SPEN-205ENST00000487496 TMEM258P61165 79 aa4.09□□□□□ -1.75
SPEN-205ENST00000487496 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SPEN-205ENST00000487496 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
SPEN-205ENST00000487496 MT1LQ93083 61 aa4.07□□□□□ -1.76
SPEN-205ENST00000487496 MT1MQ8N339 61 aa4.06□□□□□ -1.76
SPEN-205ENST00000487496 UQCR11O14957 56 aa4.03□□□□□ -1.76
SPEN-205ENST00000487496 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
SPEN-205ENST00000487496 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
SPEN-205ENST00000487496 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
SPEN-205ENST00000487496 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
SPEN-205ENST00000487496 MT4P47944 62 aa3.9□□□□□ -1.79
SPEN-205ENST00000487496 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
SPEN-205ENST00000487496 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
SPEN-205ENST00000487496 Q1T7F1 81 aa3.84□□□□□ -1.79
SPEN-205ENST00000487496 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
SPEN-205ENST00000487496 MT3P25713 68 aa3.81□□□□□ -1.8
SPEN-205ENST00000487496 ROMO1P60602 79 aa3.78□□□□□ -1.8
SPEN-205ENST00000487496 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
SPEN-205ENST00000487496 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
SPEN-205ENST00000487496 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
SPEN-205ENST00000487496 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
SPEN-205ENST00000487496 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
SPEN-205ENST00000487496 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
SPEN-205ENST00000487496 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
SPEN-205ENST00000487496 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SPEN-205ENST00000487496 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
SPEN-205ENST00000487496 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
SPEN-205ENST00000487496 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
SPEN-205ENST00000487496 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SPEN-205ENST00000487496 MT1AP04731 61 aa3.47□□□□□ -1.85
SPEN-205ENST00000487496 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
SPEN-205ENST00000487496 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
SPEN-205ENST00000487496 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
SPEN-205ENST00000487496 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SPEN-205ENST00000487496 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SPEN-205ENST00000487496 INE1O15225 51 aa3.19□□□□□ -1.9
SPEN-205ENST00000487496 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
SPEN-205ENST00000487496 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
SPEN-205ENST00000487496 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
SPEN-205ENST00000487496 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
SPEN-205ENST00000487496 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
SPEN-205ENST00000487496 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SPEN-205ENST00000487496 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
SPEN-205ENST00000487496 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
SPEN-205ENST00000487496 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SPEN-205ENST00000487496 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
SPEN-205ENST00000487496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
SPEN-205ENST00000487496 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SPEN-205ENST00000487496 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
SPEN-205ENST00000487496 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SPEN-205ENST00000487496 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
SPEN-205ENST00000487496 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SPEN-205ENST00000487496 PRM1P04553 51 aa1.84□□□□□ -2.11
SPEN-205ENST00000487496 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SPEN-205ENST00000487496 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms