RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 KRTAP5-7Q6L8G8 165 aa5.7□□□□□ -1.5
NME1-208ENST00000487481 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
NME1-208ENST00000487481 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
NME1-208ENST00000487481 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
NME1-208ENST00000487481 MT1GP13640 62 aa5.57□□□□□ -1.52
NME1-208ENST00000487481 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
NME1-208ENST00000487481 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
NME1-208ENST00000487481 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
NME1-208ENST00000487481 PSPHP1O15172 72 aa5.52□□□□□ -1.53
NME1-208ENST00000487481 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
NME1-208ENST00000487481 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
NME1-208ENST00000487481 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
NME1-208ENST00000487481 A0A1B0GU69 56 aa5.46□□□□□ -1.54
NME1-208ENST00000487481 SEC61GP60059 68 aa5.46□□□□□ -1.54
NME1-208ENST00000487481 MT1MQ8N339 61 aa5.46□□□□□ -1.54
NME1-208ENST00000487481 A6NED7 52 aa5.43□□□□□ -1.54
NME1-208ENST00000487481 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
NME1-208ENST00000487481 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.54
NME1-208ENST00000487481 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
NME1-208ENST00000487481 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
NME1-208ENST00000487481 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
NME1-208ENST00000487481 UQCR11O14957 56 aa5.36□□□□□ -1.55
NME1-208ENST00000487481 MT1LQ93083 61 aa5.34□□□□□ -1.55
NME1-208ENST00000487481 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
NME1-208ENST00000487481 A0A0D9SG42 100 aa5.31□□□□□ -1.56
NME1-208ENST00000487481 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
NME1-208ENST00000487481 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
NME1-208ENST00000487481 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
NME1-208ENST00000487481 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
NME1-208ENST00000487481 A0A1B0GU33 70 aa5.23□□□□□ -1.57
NME1-208ENST00000487481 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
NME1-208ENST00000487481 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
NME1-208ENST00000487481 A8MU10 97 aa5.14□□□□□ -1.59
NME1-208ENST00000487481 K7ERS5 55 aa5.12□□□□□ -1.59
NME1-208ENST00000487481 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
NME1-208ENST00000487481 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
NME1-208ENST00000487481 KRTAP5-11Q6L8G4 156 aa5.08□□□□□ -1.6
NME1-208ENST00000487481 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
NME1-208ENST00000487481 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
NME1-208ENST00000487481 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
NME1-208ENST00000487481 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
NME1-208ENST00000487481 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
NME1-208ENST00000487481 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
NME1-208ENST00000487481 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
NME1-208ENST00000487481 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
NME1-208ENST00000487481 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
NME1-208ENST00000487481 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
NME1-208ENST00000487481 ROMO1P60602 79 aa4.85□□□□□ -1.63
NME1-208ENST00000487481 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
NME1-208ENST00000487481 TNP1P09430 55 aa4.83□□□□□ -1.64
NME1-208ENST00000487481 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
NME1-208ENST00000487481 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
NME1-208ENST00000487481 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
NME1-208ENST00000487481 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
NME1-208ENST00000487481 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
NME1-208ENST00000487481 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
NME1-208ENST00000487481 MT1AP04731 61 aa4.54□□□□□ -1.68
NME1-208ENST00000487481 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
NME1-208ENST00000487481 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
NME1-208ENST00000487481 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
NME1-208ENST00000487481 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
NME1-208ENST00000487481 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
NME1-208ENST00000487481 MT3P25713 68 aa4.18□□□□□ -1.74
NME1-208ENST00000487481 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
NME1-208ENST00000487481 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
NME1-208ENST00000487481 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
NME1-208ENST00000487481 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
NME1-208ENST00000487481 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
NME1-208ENST00000487481 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
NME1-208ENST00000487481 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
NME1-208ENST00000487481 INE1O15225 51 aa3.39□□□□□ -1.87
NME1-208ENST00000487481 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
NME1-208ENST00000487481 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
NME1-208ENST00000487481 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
NME1-208ENST00000487481 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
NME1-208ENST00000487481 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
NME1-208ENST00000487481 PRM1P04553 51 aa2.48□□□□□ -2.01
NME1-208ENST00000487481 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms