RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ROMO1P60602 79 aa4.77□□□□□ -1.65
SREBF1-215ENST00000487401 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
SREBF1-215ENST00000487401 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
SREBF1-215ENST00000487401 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
SREBF1-215ENST00000487401 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
SREBF1-215ENST00000487401 MT1EP04732 61 aa4.64□□□□□ -1.67
SREBF1-215ENST00000487401 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SREBF1-215ENST00000487401 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
SREBF1-215ENST00000487401 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SREBF1-215ENST00000487401 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
SREBF1-215ENST00000487401 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
SREBF1-215ENST00000487401 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
SREBF1-215ENST00000487401 MT1GP13640 62 aa4.52□□□□□ -1.69
SREBF1-215ENST00000487401 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
SREBF1-215ENST00000487401 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
SREBF1-215ENST00000487401 MT1MQ8N339 61 aa4.42□□□□□ -1.7
SREBF1-215ENST00000487401 TNP1P09430 55 aa4.41□□□□□ -1.7
SREBF1-215ENST00000487401 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SREBF1-215ENST00000487401 MT1LQ93083 61 aa4.41□□□□□ -1.7
SREBF1-215ENST00000487401 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
SREBF1-215ENST00000487401 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
SREBF1-215ENST00000487401 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
SREBF1-215ENST00000487401 MT4P47944 62 aa4.37□□□□□ -1.71
SREBF1-215ENST00000487401 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
SREBF1-215ENST00000487401 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SREBF1-215ENST00000487401 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
SREBF1-215ENST00000487401 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
SREBF1-215ENST00000487401 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SREBF1-215ENST00000487401 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
SREBF1-215ENST00000487401 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
SREBF1-215ENST00000487401 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
SREBF1-215ENST00000487401 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SREBF1-215ENST00000487401 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
SREBF1-215ENST00000487401 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
SREBF1-215ENST00000487401 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
SREBF1-215ENST00000487401 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SREBF1-215ENST00000487401 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
SREBF1-215ENST00000487401 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
SREBF1-215ENST00000487401 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SREBF1-215ENST00000487401 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SREBF1-215ENST00000487401 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
SREBF1-215ENST00000487401 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SREBF1-215ENST00000487401 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
SREBF1-215ENST00000487401 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
SREBF1-215ENST00000487401 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
SREBF1-215ENST00000487401 MT1AP04731 61 aa3.75□□□□□ -1.81
SREBF1-215ENST00000487401 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SREBF1-215ENST00000487401 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
SREBF1-215ENST00000487401 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SREBF1-215ENST00000487401 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
SREBF1-215ENST00000487401 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
SREBF1-215ENST00000487401 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
SREBF1-215ENST00000487401 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SREBF1-215ENST00000487401 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SREBF1-215ENST00000487401 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SREBF1-215ENST00000487401 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SREBF1-215ENST00000487401 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SREBF1-215ENST00000487401 MT3P25713 68 aa3.47□□□□□ -1.85
SREBF1-215ENST00000487401 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
SREBF1-215ENST00000487401 INE1O15225 51 aa3.43□□□□□ -1.86
SREBF1-215ENST00000487401 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SREBF1-215ENST00000487401 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SREBF1-215ENST00000487401 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SREBF1-215ENST00000487401 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
SREBF1-215ENST00000487401 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SREBF1-215ENST00000487401 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
SREBF1-215ENST00000487401 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SREBF1-215ENST00000487401 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
SREBF1-215ENST00000487401 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SREBF1-215ENST00000487401 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SREBF1-215ENST00000487401 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
SREBF1-215ENST00000487401 PRM1P04553 51 aa2.51□□□□□ -2.01
SREBF1-215ENST00000487401 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
SREBF1-215ENST00000487401 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SREBF1-215ENST00000487401 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SREBF1-215ENST00000487401 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SREBF1-215ENST00000487401 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SREBF1-215ENST00000487401 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms