RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
SRM-205ENST00000487300 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
SRM-205ENST00000487300 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
SRM-205ENST00000487300 KRTAP5-4Q6L8H1 288 aa7.72□□□□□ -1.17
SRM-205ENST00000487300 MT4P47944 62 aa7.68□□□□□ -1.18
SRM-205ENST00000487300 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
SRM-205ENST00000487300 UQCR11O14957 56 aa7.59□□□□□ -1.19
SRM-205ENST00000487300 TMEM258P61165 79 aa7.59□□□□□ -1.19
SRM-205ENST00000487300 AHNAK2Q8IVF2 5795 aa7.57□□□□□ -1.2
SRM-205ENST00000487300 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
SRM-205ENST00000487300 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
SRM-205ENST00000487300 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SRM-205ENST00000487300 MIR22HGQ0VDD5 57 aa7.39□□□□□ -1.23
SRM-205ENST00000487300 KRTAP5-5Q701N2 237 aaPredicted RBP7.39□□□□□ -1.23
SRM-205ENST00000487300 KRTAP5-10Q6L8G5 202 aa7.38□□□□□ -1.23
SRM-205ENST00000487300 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
SRM-205ENST00000487300 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
SRM-205ENST00000487300 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
SRM-205ENST00000487300 K7ERS5 55 aa7.22□□□□□ -1.25
SRM-205ENST00000487300 V9GYY9 64 aa7.19□□□□□ -1.26
SRM-205ENST00000487300 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
SRM-205ENST00000487300 Q1T7F1 81 aa7.17□□□□□ -1.26
SRM-205ENST00000487300 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
SRM-205ENST00000487300 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
SRM-205ENST00000487300 PSPHP1O15172 72 aa7.16□□□□□ -1.26
SRM-205ENST00000487300 KRTAP5-7Q6L8G8 165 aa7.11□□□□□ -1.27
SRM-205ENST00000487300 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
SRM-205ENST00000487300 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
SRM-205ENST00000487300 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
SRM-205ENST00000487300 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
SRM-205ENST00000487300 A6NED7 52 aa6.9□□□□□ -1.3
SRM-205ENST00000487300 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
SRM-205ENST00000487300 MT1AP04731 61 aa6.79□□□□□ -1.32
SRM-205ENST00000487300 KRTAP5-2Q701N4 177 aa6.77□□□□□ -1.33
SRM-205ENST00000487300 ROMO1P60602 79 aa6.76□□□□□ -1.33
SRM-205ENST00000487300 KRTAP6-1Q3LI64 71 aa6.75□□□□□ -1.33
SRM-205ENST00000487300 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
SRM-205ENST00000487300 RPS28P62857 69 aaKnown RBP6.66□□□□□ -1.34
SRM-205ENST00000487300 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
SRM-205ENST00000487300 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
SRM-205ENST00000487300 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
SRM-205ENST00000487300 KRTAP5-8O75690 187 aa6.44□□□□□ -1.38
SRM-205ENST00000487300 OBSCNQ5VST9 7968 aa6.4□□□□□ -1.38
SRM-205ENST00000487300 PCP4P48539 62 aa6.33□□□□□ -1.4
SRM-205ENST00000487300 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
SRM-205ENST00000487300 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
SRM-205ENST00000487300 AHNAKQ09666 5890 aaKnown RBP6.21□□□□□ -1.42
SRM-205ENST00000487300 MT3P25713 68 aa6.18□□□□□ -1.42
SRM-205ENST00000487300 KRTAP5-1Q6L8H4 278 aa6.06□□□□□ -1.44
SRM-205ENST00000487300 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
SRM-205ENST00000487300 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
SRM-205ENST00000487300 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
SRM-205ENST00000487300 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
SRM-205ENST00000487300 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
SRM-205ENST00000487300 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
SRM-205ENST00000487300 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
SRM-205ENST00000487300 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
SRM-205ENST00000487300 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
SRM-205ENST00000487300 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
SRM-205ENST00000487300 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
SRM-205ENST00000487300 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
SRM-205ENST00000487300 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
SRM-205ENST00000487300 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SRM-205ENST00000487300 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
SRM-205ENST00000487300 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
SRM-205ENST00000487300 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
SRM-205ENST00000487300 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
SRM-205ENST00000487300 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
SRM-205ENST00000487300 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
SRM-205ENST00000487300 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
SRM-205ENST00000487300 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SRM-205ENST00000487300 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SRM-205ENST00000487300 PRM1P04553 51 aa3.44□□□□□ -1.86
SRM-205ENST00000487300 H3BS24 57 aa3.25□□□□□ -1.89
SRM-205ENST00000487300 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
SRM-205ENST00000487300 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
SRM-205ENST00000487300 INE1O15225 51 aa3.02□□□□□ -1.93
SRM-205ENST00000487300 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms