RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 A0A1B0GU33 70 aa7.1□□□□□ -1.27
PHF1-208ENST00000486845 MT1LQ93083 61 aa7.09□□□□□ -1.27
PHF1-208ENST00000486845 Q1T7F1 81 aa7.07□□□□□ -1.28
PHF1-208ENST00000486845 V9GYY9 64 aa7.07□□□□□ -1.28
PHF1-208ENST00000486845 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
PHF1-208ENST00000486845 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
PHF1-208ENST00000486845 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
PHF1-208ENST00000486845 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
PHF1-208ENST00000486845 PSPHP1O15172 72 aa6.99□□□□□ -1.29
PHF1-208ENST00000486845 KRTAP5-7Q6L8G8 165 aa6.97□□□□□ -1.29
PHF1-208ENST00000486845 UQCR11O14957 56 aa6.9□□□□□ -1.3
PHF1-208ENST00000486845 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
PHF1-208ENST00000486845 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
PHF1-208ENST00000486845 A8MU10 97 aa6.88□□□□□ -1.31
PHF1-208ENST00000486845 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
PHF1-208ENST00000486845 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
PHF1-208ENST00000486845 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
PHF1-208ENST00000486845 A6NED7 52 aa6.76□□□□□ -1.33
PHF1-208ENST00000486845 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
PHF1-208ENST00000486845 TNP1P09430 55 aa6.72□□□□□ -1.33
PHF1-208ENST00000486845 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
PHF1-208ENST00000486845 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
PHF1-208ENST00000486845 KRTAP5-5Q701N2 237 aaPredicted RBP6.61□□□□□ -1.35
PHF1-208ENST00000486845 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
PHF1-208ENST00000486845 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
PHF1-208ENST00000486845 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
PHF1-208ENST00000486845 K7ERS5 55 aa6.54□□□□□ -1.36
PHF1-208ENST00000486845 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
PHF1-208ENST00000486845 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
PHF1-208ENST00000486845 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
PHF1-208ENST00000486845 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
PHF1-208ENST00000486845 ROMO1P60602 79 aa6.23□□□□□ -1.41
PHF1-208ENST00000486845 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
PHF1-208ENST00000486845 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
PHF1-208ENST00000486845 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
PHF1-208ENST00000486845 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
PHF1-208ENST00000486845 MUC5ACP98088 5654 aa6.16□□□□□ -1.42
PHF1-208ENST00000486845 KRTAP5-2Q701N4 177 aa6.15□□□□□ -1.42
PHF1-208ENST00000486845 MUC5BQ9HC84 5762 aaPredicted RBP6.1□□□□□ -1.43
PHF1-208ENST00000486845 KRTAP5-8O75690 187 aa6.06□□□□□ -1.44
PHF1-208ENST00000486845 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
PHF1-208ENST00000486845 MT1AP04731 61 aa6.03□□□□□ -1.44
PHF1-208ENST00000486845 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
PHF1-208ENST00000486845 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
PHF1-208ENST00000486845 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
PHF1-208ENST00000486845 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
PHF1-208ENST00000486845 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
PHF1-208ENST00000486845 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
PHF1-208ENST00000486845 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
PHF1-208ENST00000486845 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
PHF1-208ENST00000486845 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
PHF1-208ENST00000486845 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
PHF1-208ENST00000486845 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
PHF1-208ENST00000486845 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
PHF1-208ENST00000486845 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
PHF1-208ENST00000486845 MT3P25713 68 aa5.54□□□□□ -1.52
PHF1-208ENST00000486845 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
PHF1-208ENST00000486845 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
PHF1-208ENST00000486845 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
PHF1-208ENST00000486845 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
PHF1-208ENST00000486845 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
PHF1-208ENST00000486845 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
PHF1-208ENST00000486845 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
PHF1-208ENST00000486845 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
PHF1-208ENST00000486845 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
PHF1-208ENST00000486845 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
PHF1-208ENST00000486845 H3BS24 57 aa4.28□□□□□ -1.72
PHF1-208ENST00000486845 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
PHF1-208ENST00000486845 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
PHF1-208ENST00000486845 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
PHF1-208ENST00000486845 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
PHF1-208ENST00000486845 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
PHF1-208ENST00000486845 INE1O15225 51 aa3.72□□□□□ -1.81
PHF1-208ENST00000486845 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
PHF1-208ENST00000486845 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PHF1-208ENST00000486845 PRM1P04553 51 aa3.23□□□□□ -1.89
PHF1-208ENST00000486845 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
PHF1-208ENST00000486845 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms