RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
ARHGEF3-211ENST00000486829 NEBP20929 6669 aa4.48□□□□□ -1.69
ARHGEF3-211ENST00000486829 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
ARHGEF3-211ENST00000486829 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
ARHGEF3-211ENST00000486829 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
ARHGEF3-211ENST00000486829 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
ARHGEF3-211ENST00000486829 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
ARHGEF3-211ENST00000486829 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
ARHGEF3-211ENST00000486829 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
ARHGEF3-211ENST00000486829 ROMO1P60602 79 aa4.4□□□□□ -1.71
ARHGEF3-211ENST00000486829 SPRR2EP22531 72 aa4.38□□□□□ -1.71
ARHGEF3-211ENST00000486829 SPRR2BP35325 72 aa4.38□□□□□ -1.71
ARHGEF3-211ENST00000486829 SPRR2AP35326 72 aa4.38□□□□□ -1.71
ARHGEF3-211ENST00000486829 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
ARHGEF3-211ENST00000486829 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
ARHGEF3-211ENST00000486829 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
ARHGEF3-211ENST00000486829 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
ARHGEF3-211ENST00000486829 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
ARHGEF3-211ENST00000486829 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
ARHGEF3-211ENST00000486829 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
ARHGEF3-211ENST00000486829 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
ARHGEF3-211ENST00000486829 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
ARHGEF3-211ENST00000486829 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
ARHGEF3-211ENST00000486829 SPRR2DP22532 72 aa4.23□□□□□ -1.73
ARHGEF3-211ENST00000486829 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
ARHGEF3-211ENST00000486829 MT1EP04732 61 aa4.22□□□□□ -1.73
ARHGEF3-211ENST00000486829 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
ARHGEF3-211ENST00000486829 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
ARHGEF3-211ENST00000486829 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
ARHGEF3-211ENST00000486829 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
ARHGEF3-211ENST00000486829 MT1LQ93083 61 aa4.09□□□□□ -1.75
ARHGEF3-211ENST00000486829 MT1GP13640 62 aa4.08□□□□□ -1.76
ARHGEF3-211ENST00000486829 MT3P25713 68 aa4.04□□□□□ -1.76
ARHGEF3-211ENST00000486829 MT1MQ8N339 61 aa3.99□□□□□ -1.77
ARHGEF3-211ENST00000486829 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
ARHGEF3-211ENST00000486829 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
ARHGEF3-211ENST00000486829 DSTQ03001 7570 aaKnown RBP3.94□□□□□ -1.78
ARHGEF3-211ENST00000486829 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
ARHGEF3-211ENST00000486829 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
ARHGEF3-211ENST00000486829 MT4P47944 62 aa3.71□□□□□ -1.82
ARHGEF3-211ENST00000486829 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
ARHGEF3-211ENST00000486829 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
ARHGEF3-211ENST00000486829 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
ARHGEF3-211ENST00000486829 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
ARHGEF3-211ENST00000486829 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
ARHGEF3-211ENST00000486829 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
ARHGEF3-211ENST00000486829 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
ARHGEF3-211ENST00000486829 MT1AP04731 61 aa3.5□□□□□ -1.85
ARHGEF3-211ENST00000486829 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
ARHGEF3-211ENST00000486829 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ARHGEF3-211ENST00000486829 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
ARHGEF3-211ENST00000486829 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
ARHGEF3-211ENST00000486829 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
ARHGEF3-211ENST00000486829 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
ARHGEF3-211ENST00000486829 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
ARHGEF3-211ENST00000486829 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
ARHGEF3-211ENST00000486829 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
ARHGEF3-211ENST00000486829 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
ARHGEF3-211ENST00000486829 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
ARHGEF3-211ENST00000486829 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
ARHGEF3-211ENST00000486829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
ARHGEF3-211ENST00000486829 INE1O15225 51 aa2.97□□□□□ -1.93
ARHGEF3-211ENST00000486829 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
ARHGEF3-211ENST00000486829 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
ARHGEF3-211ENST00000486829 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
ARHGEF3-211ENST00000486829 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
ARHGEF3-211ENST00000486829 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
ARHGEF3-211ENST00000486829 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
ARHGEF3-211ENST00000486829 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
ARHGEF3-211ENST00000486829 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
ARHGEF3-211ENST00000486829 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
ARHGEF3-211ENST00000486829 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
ARHGEF3-211ENST00000486829 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
ARHGEF3-211ENST00000486829 PRM1P04553 51 aa2.25□□□□□ -2.05
ARHGEF3-211ENST00000486829 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
ARHGEF3-211ENST00000486829 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
ARHGEF3-211ENST00000486829 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
ARHGEF3-211ENST00000486829 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 71.9 ms