RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
APH1A-208ENST00000486720 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
APH1A-208ENST00000486720 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
APH1A-208ENST00000486720 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
APH1A-208ENST00000486720 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
APH1A-208ENST00000486720 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
APH1A-208ENST00000486720 MT1GP13640 62 aa5.24□□□□□ -1.57
APH1A-208ENST00000486720 MT1LQ93083 61 aa5.24□□□□□ -1.57
APH1A-208ENST00000486720 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
APH1A-208ENST00000486720 H3BS24 57 aa5.2□□□□□ -1.58
APH1A-208ENST00000486720 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
APH1A-208ENST00000486720 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
APH1A-208ENST00000486720 MT1MQ8N339 61 aa5.13□□□□□ -1.59
APH1A-208ENST00000486720 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
APH1A-208ENST00000486720 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
APH1A-208ENST00000486720 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
APH1A-208ENST00000486720 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
APH1A-208ENST00000486720 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
APH1A-208ENST00000486720 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
APH1A-208ENST00000486720 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
APH1A-208ENST00000486720 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
APH1A-208ENST00000486720 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
APH1A-208ENST00000486720 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
APH1A-208ENST00000486720 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
APH1A-208ENST00000486720 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
APH1A-208ENST00000486720 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
APH1A-208ENST00000486720 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
APH1A-208ENST00000486720 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
APH1A-208ENST00000486720 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
APH1A-208ENST00000486720 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
APH1A-208ENST00000486720 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
APH1A-208ENST00000486720 MT4P47944 62 aa4.59□□□□□ -1.67
APH1A-208ENST00000486720 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
APH1A-208ENST00000486720 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
APH1A-208ENST00000486720 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
APH1A-208ENST00000486720 MT1AP04731 61 aa4.48□□□□□ -1.69
APH1A-208ENST00000486720 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
APH1A-208ENST00000486720 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
APH1A-208ENST00000486720 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
APH1A-208ENST00000486720 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
APH1A-208ENST00000486720 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
APH1A-208ENST00000486720 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
APH1A-208ENST00000486720 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
APH1A-208ENST00000486720 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
APH1A-208ENST00000486720 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
APH1A-208ENST00000486720 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
APH1A-208ENST00000486720 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
APH1A-208ENST00000486720 MT3P25713 68 aa4.1□□□□□ -1.75
APH1A-208ENST00000486720 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
APH1A-208ENST00000486720 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
APH1A-208ENST00000486720 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
APH1A-208ENST00000486720 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
APH1A-208ENST00000486720 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
APH1A-208ENST00000486720 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
APH1A-208ENST00000486720 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
APH1A-208ENST00000486720 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
APH1A-208ENST00000486720 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
APH1A-208ENST00000486720 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
APH1A-208ENST00000486720 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
APH1A-208ENST00000486720 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
APH1A-208ENST00000486720 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
APH1A-208ENST00000486720 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
APH1A-208ENST00000486720 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
APH1A-208ENST00000486720 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
APH1A-208ENST00000486720 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
APH1A-208ENST00000486720 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
APH1A-208ENST00000486720 INE1O15225 51 aa3.19□□□□□ -1.9
APH1A-208ENST00000486720 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
APH1A-208ENST00000486720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
APH1A-208ENST00000486720 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
APH1A-208ENST00000486720 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
APH1A-208ENST00000486720 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
APH1A-208ENST00000486720 PRM1P04553 51 aa2.79□□□□□ -1.96
APH1A-208ENST00000486720 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
APH1A-208ENST00000486720 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
APH1A-208ENST00000486720 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
APH1A-208ENST00000486720 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
APH1A-208ENST00000486720 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms