RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 C20orf197Q8N268 126 aa5.26□□□□□ -1.57
U2AF1-211ENST00000486519 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
U2AF1-211ENST00000486519 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
U2AF1-211ENST00000486519 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
U2AF1-211ENST00000486519 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
U2AF1-211ENST00000486519 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
U2AF1-211ENST00000486519 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
U2AF1-211ENST00000486519 ATP5EP56381 51 aaPredicted RBP5.12□□□□□ -1.59
U2AF1-211ENST00000486519 H7BZZ5 65 aa5.09□□□□□ -1.59
U2AF1-211ENST00000486519 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
U2AF1-211ENST00000486519 A0A0D9SG42 100 aa5.08□□□□□ -1.6
U2AF1-211ENST00000486519 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
U2AF1-211ENST00000486519 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
U2AF1-211ENST00000486519 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
U2AF1-211ENST00000486519 ACYP2P14621 99 aa5.01□□□□□ -1.61
U2AF1-211ENST00000486519 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
U2AF1-211ENST00000486519 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
U2AF1-211ENST00000486519 CHKB-CPT1BH3BT56 60 aa4.97□□□□□ -1.61
U2AF1-211ENST00000486519 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
U2AF1-211ENST00000486519 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
U2AF1-211ENST00000486519 COA5Q86WW8 74 aa4.89□□□□□ -1.63
U2AF1-211ENST00000486519 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
U2AF1-211ENST00000486519 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
U2AF1-211ENST00000486519 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
U2AF1-211ENST00000486519 Q1T7F1 81 aa4.86□□□□□ -1.63
U2AF1-211ENST00000486519 V9GYY9 64 aa4.85□□□□□ -1.63
U2AF1-211ENST00000486519 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
U2AF1-211ENST00000486519 SEC61GP60059 68 aa4.78□□□□□ -1.64
U2AF1-211ENST00000486519 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
U2AF1-211ENST00000486519 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
U2AF1-211ENST00000486519 A0A1B0GU69 56 aa4.68□□□□□ -1.66
U2AF1-211ENST00000486519 PSPHP1O15172 72 aa4.68□□□□□ -1.66
U2AF1-211ENST00000486519 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
U2AF1-211ENST00000486519 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
U2AF1-211ENST00000486519 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
U2AF1-211ENST00000486519 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
U2AF1-211ENST00000486519 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
U2AF1-211ENST00000486519 A0A1B0GU33 70 aa4.57□□□□□ -1.68
U2AF1-211ENST00000486519 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
U2AF1-211ENST00000486519 A6NED7 52 aa4.56□□□□□ -1.68
U2AF1-211ENST00000486519 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
U2AF1-211ENST00000486519 A8MU10 97 aa4.53□□□□□ -1.68
U2AF1-211ENST00000486519 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
U2AF1-211ENST00000486519 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
U2AF1-211ENST00000486519 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
U2AF1-211ENST00000486519 UQCR11O14957 56 aa4.5□□□□□ -1.69
U2AF1-211ENST00000486519 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
U2AF1-211ENST00000486519 MT1AP04731 61 aa4.46□□□□□ -1.7
U2AF1-211ENST00000486519 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
U2AF1-211ENST00000486519 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
U2AF1-211ENST00000486519 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
U2AF1-211ENST00000486519 K7ERS5 55 aa4.34□□□□□ -1.71
U2AF1-211ENST00000486519 TNP1P09430 55 aa4.34□□□□□ -1.71
U2AF1-211ENST00000486519 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
U2AF1-211ENST00000486519 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
U2AF1-211ENST00000486519 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
U2AF1-211ENST00000486519 MT3P25713 68 aa4.06□□□□□ -1.76
U2AF1-211ENST00000486519 ROMO1P60602 79 aa4.04□□□□□ -1.76
U2AF1-211ENST00000486519 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
U2AF1-211ENST00000486519 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
U2AF1-211ENST00000486519 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
U2AF1-211ENST00000486519 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
U2AF1-211ENST00000486519 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
U2AF1-211ENST00000486519 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
U2AF1-211ENST00000486519 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
U2AF1-211ENST00000486519 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
U2AF1-211ENST00000486519 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
U2AF1-211ENST00000486519 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
U2AF1-211ENST00000486519 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
U2AF1-211ENST00000486519 INE1O15225 51 aa3.1□□□□□ -1.91
U2AF1-211ENST00000486519 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
U2AF1-211ENST00000486519 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
U2AF1-211ENST00000486519 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
U2AF1-211ENST00000486519 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
U2AF1-211ENST00000486519 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
U2AF1-211ENST00000486519 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
U2AF1-211ENST00000486519 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
U2AF1-211ENST00000486519 PRM1P04553 51 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms