RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 KRTAP19-3Q7Z4W3 81 aa8.36□□□□□ -1.07
SREBF1-214ENST00000486311 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
SREBF1-214ENST00000486311 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
SREBF1-214ENST00000486311 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
SREBF1-214ENST00000486311 MT1GP13640 62 aa8.13□□□□□ -1.11
SREBF1-214ENST00000486311 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
SREBF1-214ENST00000486311 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
SREBF1-214ENST00000486311 TNP1P09430 55 aa8.05□□□□□ -1.12
SREBF1-214ENST00000486311 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
SREBF1-214ENST00000486311 MT1MQ8N339 61 aa7.99□□□□□ -1.13
SREBF1-214ENST00000486311 HMCN1Q96RW7 5635 aa7.98□□□□□ -1.13
SREBF1-214ENST00000486311 ROMO1P60602 79 aa7.97□□□□□ -1.13
SREBF1-214ENST00000486311 MT1LQ93083 61 aa7.96□□□□□ -1.14
SREBF1-214ENST00000486311 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
SREBF1-214ENST00000486311 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
SREBF1-214ENST00000486311 MT4P47944 62 aa7.9□□□□□ -1.14
SREBF1-214ENST00000486311 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
SREBF1-214ENST00000486311 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
SREBF1-214ENST00000486311 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
SREBF1-214ENST00000486311 KRTAP4-3Q9BYR4 195 aa7.79□□□□□ -1.16
SREBF1-214ENST00000486311 KRTAP5-4Q6L8H1 288 aa7.77□□□□□ -1.17
SREBF1-214ENST00000486311 AHNAK2Q8IVF2 5795 aa7.77□□□□□ -1.17
SREBF1-214ENST00000486311 KRTAP5-10Q6L8G5 202 aa7.69□□□□□ -1.18
SREBF1-214ENST00000486311 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
SREBF1-214ENST00000486311 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
SREBF1-214ENST00000486311 KRTAP12-3P60328 96 aa7.55□□□□□ -1.2
SREBF1-214ENST00000486311 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
SREBF1-214ENST00000486311 KRTAP5-7Q6L8G8 165 aa7.45□□□□□ -1.22
SREBF1-214ENST00000486311 KRTAP5-3Q6L8H2 238 aa7.43□□□□□ -1.22
SREBF1-214ENST00000486311 KRTAP5-5Q701N2 237 aaPredicted RBP7.37□□□□□ -1.23
SREBF1-214ENST00000486311 KRTAP20-2Q3LI61 65 aa7.34□□□□□ -1.23
SREBF1-214ENST00000486311 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
SREBF1-214ENST00000486311 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
SREBF1-214ENST00000486311 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
SREBF1-214ENST00000486311 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
SREBF1-214ENST00000486311 KRTAP15-1Q3LI76 137 aa7.19□□□□□ -1.26
SREBF1-214ENST00000486311 LOC100996750A0A140TA64 210 aa7.16□□□□□ -1.26
SREBF1-214ENST00000486311 SYNE1Q8NF91 8797 aaKnown RBP7.15□□□□□ -1.27
SREBF1-214ENST00000486311 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
SREBF1-214ENST00000486311 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
SREBF1-214ENST00000486311 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
SREBF1-214ENST00000486311 KRTAP5-2Q701N4 177 aa6.78□□□□□ -1.32
SREBF1-214ENST00000486311 MT1AP04731 61 aa6.77□□□□□ -1.33
SREBF1-214ENST00000486311 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
SREBF1-214ENST00000486311 KRTAP6-1Q3LI64 71 aa6.75□□□□□ -1.33
SREBF1-214ENST00000486311 KRTAP5-8O75690 187 aa6.57□□□□□ -1.36
SREBF1-214ENST00000486311 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
SREBF1-214ENST00000486311 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
SREBF1-214ENST00000486311 KRTAP6-2Q3LI66 62 aa6.49□□□□□ -1.37
SREBF1-214ENST00000486311 AHNAKQ09666 5890 aaKnown RBP6.48□□□□□ -1.37
SREBF1-214ENST00000486311 MUC5ACP98088 5654 aa6.47□□□□□ -1.37
SREBF1-214ENST00000486311 MUC5BQ9HC84 5762 aaPredicted RBP6.46□□□□□ -1.38
SREBF1-214ENST00000486311 OBSCNQ5VST9 7968 aa6.44□□□□□ -1.38
SREBF1-214ENST00000486311 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
SREBF1-214ENST00000486311 MT3P25713 68 aa6.21□□□□□ -1.42
SREBF1-214ENST00000486311 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
SREBF1-214ENST00000486311 KRTAP5-1Q6L8H4 278 aa6.11□□□□□ -1.43
SREBF1-214ENST00000486311 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
SREBF1-214ENST00000486311 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
SREBF1-214ENST00000486311 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
SREBF1-214ENST00000486311 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
SREBF1-214ENST00000486311 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
SREBF1-214ENST00000486311 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
SREBF1-214ENST00000486311 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
SREBF1-214ENST00000486311 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
SREBF1-214ENST00000486311 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
SREBF1-214ENST00000486311 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
SREBF1-214ENST00000486311 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
SREBF1-214ENST00000486311 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
SREBF1-214ENST00000486311 INE1O15225 51 aa4.68□□□□□ -1.66
SREBF1-214ENST00000486311 PHGR1C9JFL3 82 aa4.49□□□□□ -1.69
SREBF1-214ENST00000486311 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
SREBF1-214ENST00000486311 H3BS24 57 aa4.44□□□□□ -1.7
SREBF1-214ENST00000486311 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
SREBF1-214ENST00000486311 PRM1P04553 51 aa4.08□□□□□ -1.76
SREBF1-214ENST00000486311 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
SREBF1-214ENST00000486311 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
SREBF1-214ENST00000486311 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 4.9 ms